Gene annotation
Transcriptome id Sobic.009G257700.1
Synonym Sb09g030740
Functional annotation N-rich protein, putative, expressed
UniProt C5YX20
Pfam PF10539
Panther DB PTHR10857 PTHR10857:SF54
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42050 : DCD (Development and Cell Death) domain protein
RAP-DB (Rice) LOC_Os01g36950.2 : N-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a036816 , Zm00025a028797 , Zm00025a038326
Brachypodium KQK08279
Barley HORVU5Hr1G111870.12 , HORVU5Hr1G111870.11 , HORVU5Hr1G111870.10 , HORVU5Hr1G111870.7 , HORVU5Hr1G111870.6 , HORVU5Hr1G111870.5 , HORVU5Hr1G111870.4 , HORVU5Hr1G111870.3 , HORVU5Hr1G111870.2 , HORVU5Hr1G111870.1 , HORVU5Hr1G111870.9 , HORVU5Hr1G111870.8
Wheat TraesCS5D02G482800 , TraesCS5A02G469800 , TraesCS5B02G482400
Populus -


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cDNA sequences
Sobic.009G257700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
4 Sobic.004G337900 ENTH domain containing protein, expressed K12471: epsin
5 Sobic.009G072200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
6 Sobic.002G020900 GCRP5 - Glycine and cysteine rich family protein precursor, expressed -
7 Sobic.003G019800 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -
9 Sobic.010G035900 expressed protein -
10 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
11 Sobic.007G132700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
12 Sobic.005G092000 resistance protein, putative, expressed -
13 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
14 Sobic.001G127800 nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
15 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
16 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
17 Sobic.008G088830 - -
18 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
19 Sobic.001G460300 expressed protein -
20 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -


Gene co-expression network
sample Sobic009G257700 Sobic009G257700 Sobic010G197500 Sobic010G197500 Sobic009G257700--Sobic010G197500 Sobic003G019700 Sobic003G019700 Sobic009G257700--Sobic003G019700 Sobic005G195600 Sobic005G195600 Sobic009G257700--Sobic005G195600 Sobic004G337900 Sobic004G337900 Sobic009G257700--Sobic004G337900 Sobic009G072200 Sobic009G072200 Sobic009G257700--Sobic009G072200 Sobic002G020900 Sobic002G020900 Sobic009G257700--Sobic002G020900 Sobic003G019800 Sobic003G019800 Sobic009G257700--Sobic003G019800 Sobic009G229300 Sobic009G229300 Sobic009G257700--Sobic009G229300 Sobic010G035900 Sobic010G035900 Sobic009G257700--Sobic010G035900 Sobic010G197500--Sobic009G257700 Sobic008G123500 Sobic008G123500 Sobic010G197500--Sobic008G123500 Sobic001G127200 Sobic001G127200 Sobic010G197500--Sobic001G127200 Sobic002G348600 Sobic002G348600 Sobic010G197500--Sobic002G348600 Sobic003G227100 Sobic003G227100 Sobic010G197500--Sobic003G227100 Sobic001G023100 Sobic001G023100 Sobic010G197500--Sobic001G023100 Sobic003G332000 Sobic003G332000 Sobic010G197500--Sobic003G332000 Sobic006G203100 Sobic006G203100 Sobic010G197500--Sobic006G203100 Sobic003G336100 Sobic003G336100 Sobic010G197500--Sobic003G336100 Sobic003G019700--Sobic003G019800 Sobic003G016600 Sobic003G016600 Sobic003G019700--Sobic003G016600 Sobic005G092000 Sobic005G092000 Sobic003G019700--Sobic005G092000 Sobic005G110490 Sobic005G110490 Sobic003G019700--Sobic005G110490 Sobic003G019700--Sobic009G257700 Sobic003G019700--Sobic010G035900 Sobic006G076201 Sobic006G076201 Sobic003G019700--Sobic006G076201 Sobic002G372800 Sobic002G372800 Sobic003G019700--Sobic002G372800 Sobic010G069900 Sobic010G069900 Sobic003G019700--Sobic010G069900 Sobic006G191100 Sobic006G191100 Sobic005G195600--Sobic006G191100 Sobic005G195600--Sobic006G076201 Sobic006G064800 Sobic006G064800 Sobic005G195600--Sobic006G064800 Sobic006G087900 Sobic006G087900 Sobic005G195600--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic005G195600--Sobic003G278700 Sobic002G325900 Sobic002G325900 Sobic005G195600--Sobic002G325900 Sobic004G172100 Sobic004G172100 Sobic005G195600--Sobic004G172100 Sobic004G145200 Sobic004G145200 Sobic005G195600--Sobic004G145200 Sobic007G225300 Sobic007G225300 Sobic005G195600--Sobic007G225300 Sobic003G353400 Sobic003G353400 Sobic004G337900--Sobic003G353400 Sobic001G450800 Sobic001G450800 Sobic004G337900--Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic004G337900--Sobic003G361300 Sobic004G337900--Sobic003G278700 Sobic003G198200 Sobic003G198200 Sobic004G337900--Sobic003G198200 Sobic003G198150 Sobic003G198150 Sobic004G337900--Sobic003G198150 Sobic001G157400 Sobic001G157400 Sobic004G337900--Sobic001G157400 Sobic004G337900--Sobic009G229300 Sobic009G099000 Sobic009G099000 Sobic004G337900--Sobic009G099000 Sobic002G164960 Sobic002G164960 Sobic009G072200--Sobic002G164960 Sobic010G165200 Sobic010G165200 Sobic009G072200--Sobic010G165200 Sobic001G127800 Sobic001G127800 Sobic009G072200--Sobic001G127800 Sobic009G072200--Sobic009G257700 Sobic006G000300 Sobic006G000300 Sobic009G072200--Sobic006G000300 Sobic009G072200--Sobic006G064800 Sobic002G075800 Sobic002G075800 Sobic009G072200--Sobic002G075800 Sobic007G152800 Sobic007G152800 Sobic009G072200--Sobic007G152800 Sobic002G173800 Sobic002G173800 Sobic009G072200--Sobic002G173800 Sobic010G236500 Sobic010G236500 Sobic002G020900--Sobic010G236500 Sobic002G292600 Sobic002G292600 Sobic002G020900--Sobic002G292600 Sobic003G414600 Sobic003G414600 Sobic002G020900--Sobic003G414600 Sobic002G020900--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic002G020900--Sobic009G241700 Sobic001G012800 Sobic001G012800 Sobic002G020900--Sobic001G012800 Sobic009G213700 Sobic009G213700 Sobic002G020900--Sobic009G213700 Sobic002G020900--Sobic005G195600 Sobic002G020900--Sobic007G225300 Sobic003G019800--Sobic003G019700 Sobic003G019800--Sobic009G257700 Sobic003G019800--Sobic005G092000 Sobic003G313400 Sobic003G313400 Sobic003G019800--Sobic003G313400 Sobic004G163300 Sobic004G163300 Sobic003G019800--Sobic004G163300 Sobic005G131301 Sobic005G131301 Sobic003G019800--Sobic005G131301 Sobic005G075600 Sobic005G075600 Sobic003G019800--Sobic005G075600 Sobic003G019800--Sobic010G035900 Sobic002G312700 Sobic002G312700 Sobic003G019800--Sobic002G312700 Sobic008G003600 Sobic008G003600 Sobic009G229300--Sobic008G003600 Sobic001G512000 Sobic001G512000 Sobic009G229300--Sobic001G512000 Sobic001G230100 Sobic001G230100 Sobic009G229300--Sobic001G230100 Sobic003G052400 Sobic003G052400 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic010G035900--Sobic005G092000 Sobic001G396400 Sobic001G396400 Sobic010G035900--Sobic001G396400 Sobic001G132800 Sobic001G132800 Sobic010G035900--Sobic001G132800 Sobic008G087400 Sobic008G087400 Sobic010G035900--Sobic008G087400 Sobic009G027800 Sobic009G027800 Sobic010G035900--Sobic009G027800 Sobic010G035900--Sobic005G110490 Sobic007G172500 Sobic007G172500 Sobic010G035900--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic010G035900--Sobic002G167000 Sobic010G035900--Sobic004G172100
Octagon: transcription factors


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