Gene annotation
Transcriptome id Sobic.003G019700.1
Synonym Sb03g001870
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XL17
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11650.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a041574 , Zm00025a041575 , Zm00025a041578 , Zm00025a035918 , Zm00025a022892 , Zm00025a049986 , Zm00025a019854 , Zm00025a050939
Brachypodium KQK07048 , KQK07045 , KQK07046 , KQK07047 , PNT70157 , PNT70159 , PNT70158 , PNT70160 , KQK18108 , PNT75836 , KQK03301 , KQK03300 , KQK03304
Barley HORVU2Hr1G025860.3 , HORVU2Hr1G025860.2 , HORVU7Hr1G024220.3 , HORVU7Hr1G024220.2 , HORVU7Hr1G024220.4 , HORVU2Hr1G025860.1 , HORVU3Hr1G028060.4 , HORVU3Hr1G028060.3 , HORVU3Hr1G028060.2 , HORVU3Hr1G028020.3 , HORVU3Hr1G028020.2 , HORVU3Hr1G028020.5 , HORVU3Hr1G028020.8 , HORVU3Hr1G028020.1 , HORVU3Hr1G028020.4 , HORVU7Hr1G024220.1 , HORVU7Hr1G024220.5 , HORVU7Hr1G079720.1 , HORVU7Hr1G079720.2 , HORVU7Hr1G079720.3 , HORVU7Hr1G079720.4 , HORVU7Hr1G079720.5 , HORVU3Hr1G028020.6
Wheat TraesCS3B02G290800 , TraesCS3B02G290800 , TraesCS3A02G141300 , TraesCS5A02G287100 , TraesCS3B02G163700 , TraesCS3B02G163700 , TraesCS1B02G333800 , TraesCS7B02G233800 , TraesCSU02G095400 , TraesCSU02G158200 , TraesCS7A02G348900 , TraesCS3B02G163500 , TraesCS7D02G108900 , TraesCS5D02G294700 , TraesCS5D02G294700 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS3D02G146000 , TraesCS1D02G321300 , TraesCS7A02G113600 , TraesCS3D02G146200 , TraesCS3A02G140900 , TraesCS3A02G141100 , TraesCSU02G168000 , TraesCS3A02G258100 , TraesCS3A02G258100 , TraesCS3A02G258100 , TraesCS1A02G321100 , TraesCS7D02G329700
Populus -


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cDNA sequences
Sobic.003G019700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G019800 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.005G092000 resistance protein, putative, expressed -
4 Sobic.005G110490 - -
5 Sobic.009G257700 N-rich protein, putative, expressed -
6 Sobic.010G035900 expressed protein -
7 Sobic.006G076201 - -
8 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
9 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
11 Sobic.001G108350 - -
12 Sobic.002G362900 IBS1, putative, expressed -
13 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
14 Sobic.005G211400 cytochrome P450, putative, expressed -
15 Sobic.001G396400 expressed protein -
16 Sobic.010G192432 - K14431: transcription factor TGA
17 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
18 Sobic.010G161450 - -
19 Sobic.010G220600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
20 Sobic.005G075600 rp3 protein, putative, expressed -


Gene co-expression network
sample Sobic003G019700 Sobic003G019700 Sobic003G019800 Sobic003G019800 Sobic003G019700--Sobic003G019800 Sobic003G016600 Sobic003G016600 Sobic003G019700--Sobic003G016600 Sobic005G092000 Sobic005G092000 Sobic003G019700--Sobic005G092000 Sobic005G110490 Sobic005G110490 Sobic003G019700--Sobic005G110490 Sobic009G257700 Sobic009G257700 Sobic003G019700--Sobic009G257700 Sobic010G035900 Sobic010G035900 Sobic003G019700--Sobic010G035900 Sobic006G076201 Sobic006G076201 Sobic003G019700--Sobic006G076201 Sobic002G372800 Sobic002G372800 Sobic003G019700--Sobic002G372800 Sobic010G069900 Sobic010G069900 Sobic003G019700--Sobic010G069900 Sobic003G019800--Sobic003G019700 Sobic003G019800--Sobic009G257700 Sobic003G019800--Sobic005G092000 Sobic003G313400 Sobic003G313400 Sobic003G019800--Sobic003G313400 Sobic004G163300 Sobic004G163300 Sobic003G019800--Sobic004G163300 Sobic005G131301 Sobic005G131301 Sobic003G019800--Sobic005G131301 Sobic005G075600 Sobic005G075600 Sobic003G019800--Sobic005G075600 Sobic003G019800--Sobic010G035900 Sobic002G312700 Sobic002G312700 Sobic003G019800--Sobic002G312700 Sobic006G087900 Sobic006G087900 Sobic003G016600--Sobic006G087900 Sobic003G016600--Sobic006G076201 Sobic006G191100 Sobic006G191100 Sobic003G016600--Sobic006G191100 Sobic002G325900 Sobic002G325900 Sobic003G016600--Sobic002G325900 Sobic003G016600--Sobic010G069900 Sobic003G294400 Sobic003G294400 Sobic003G016600--Sobic003G294400 Sobic003G016600--Sobic003G019700 Sobic001G012800 Sobic001G012800 Sobic003G016600--Sobic001G012800 Sobic002G362900 Sobic002G362900 Sobic003G016600--Sobic002G362900 Sobic005G092000--Sobic010G035900 Sobic002G081800 Sobic002G081800 Sobic005G092000--Sobic002G081800 Sobic005G022200 Sobic005G022200 Sobic005G092000--Sobic005G022200 Sobic002G081850 Sobic002G081850 Sobic005G092000--Sobic002G081850 Sobic007G172500 Sobic007G172500 Sobic005G092000--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic005G092000--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic005G092000--Sobic004G172100 Sobic004G339800 Sobic004G339800 Sobic005G092000--Sobic004G339800 Sobic007G009500 Sobic007G009500 Sobic005G092000--Sobic007G009500 Sobic005G110490--Sobic007G009500 Sobic001G006201 Sobic001G006201 Sobic005G110490--Sobic001G006201 Sobic004G248500 Sobic004G248500 Sobic005G110490--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic005G110490--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic005G110490--Sobic001G503000 Sobic010G192366 Sobic010G192366 Sobic005G110490--Sobic010G192366 Sobic007G167400 Sobic007G167400 Sobic005G110490--Sobic007G167400 Sobic004G312200 Sobic004G312200 Sobic005G110490--Sobic004G312200 Sobic002G318200 Sobic002G318200 Sobic005G110490--Sobic002G318200 Sobic010G197500 Sobic010G197500 Sobic009G257700--Sobic010G197500 Sobic009G257700--Sobic003G019700 Sobic005G195600 Sobic005G195600 Sobic009G257700--Sobic005G195600 Sobic004G337900 Sobic004G337900 Sobic009G257700--Sobic004G337900 Sobic009G072200 Sobic009G072200 Sobic009G257700--Sobic009G072200 Sobic002G020900 Sobic002G020900 Sobic009G257700--Sobic002G020900 Sobic009G257700--Sobic003G019800 Sobic009G229300 Sobic009G229300 Sobic009G257700--Sobic009G229300 Sobic009G257700--Sobic010G035900 Sobic010G035900--Sobic005G092000 Sobic001G396400 Sobic001G396400 Sobic010G035900--Sobic001G396400 Sobic001G132800 Sobic001G132800 Sobic010G035900--Sobic001G132800 Sobic008G087400 Sobic008G087400 Sobic010G035900--Sobic008G087400 Sobic009G027800 Sobic009G027800 Sobic010G035900--Sobic009G027800 Sobic010G035900--Sobic005G110490 Sobic010G035900--Sobic007G172500 Sobic010G035900--Sobic002G167000 Sobic010G035900--Sobic004G172100 Sobic006G076201--Sobic006G087900 Sobic004G145200 Sobic004G145200 Sobic006G076201--Sobic004G145200 Sobic006G076201--Sobic002G325900 Sobic010G236500 Sobic010G236500 Sobic006G076201--Sobic010G236500 Sobic006G076201--Sobic005G195600 Sobic006G076201--Sobic006G191100 Sobic006G076201--Sobic003G016600 Sobic002G242500 Sobic002G242500 Sobic006G076201--Sobic002G242500 Sobic006G076201--Sobic002G362900 Sobic002G372800--Sobic007G009500 Sobic003G127100 Sobic003G127100 Sobic002G372800--Sobic003G127100 Sobic001G108350 Sobic001G108350 Sobic002G372800--Sobic001G108350 Sobic004G257800 Sobic004G257800 Sobic002G372800--Sobic004G257800 Sobic002G372800--Sobic005G110490 Sobic001G063600 Sobic001G063600 Sobic002G372800--Sobic001G063600 Sobic002G372800--Sobic002G325900 Sobic006G242100 Sobic006G242100 Sobic002G372800--Sobic006G242100 Sobic010G008600 Sobic010G008600 Sobic002G372800--Sobic010G008600 Sobic003G227700 Sobic003G227700 Sobic010G069900--Sobic003G227700 Sobic010G071400 Sobic010G071400 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800
Octagon: transcription factors


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