Gene annotation
Transcriptome id Sobic.005G075600.1
Synonym
Functional annotation rp3 protein, putative, expressed
UniProt A0A1B6PQR7
Pfam PF13401
Panther DB PTHR23155 PTHR23155:SF455
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g23990.1 : rp3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a035225
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.010G126900 lectin-like receptor kinase, putative, expressed -
3 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
4 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
5 Sobic.004G153100 disease resistance protein, putative, expressed -
6 Sobic.001G218500 MATH domain containing protein, expressed -
7 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
9 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
10 Sobic.002G081850 - -
11 Sobic.001G326400 cytochrome P450, putative, expressed -
12 Sobic.001G454900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
13 Sobic.003G017601 - -
14 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
16 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
17 Sobic.005G110511 - -
18 Sobic.002G081800 RGH1A, putative, expressed -
19 Sobic.002G166150 - -
20 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic005G075600 Sobic005G075600 Sobic007G120000 Sobic007G120000 Sobic005G075600--Sobic007G120000 Sobic010G126900 Sobic010G126900 Sobic005G075600--Sobic010G126900 Sobic007G119800 Sobic007G119800 Sobic005G075600--Sobic007G119800 Sobic004G103400 Sobic004G103400 Sobic005G075600--Sobic004G103400 Sobic004G153100 Sobic004G153100 Sobic005G075600--Sobic004G153100 Sobic001G218500 Sobic001G218500 Sobic005G075600--Sobic001G218500 Sobic003G020500 Sobic003G020500 Sobic005G075600--Sobic003G020500 Sobic003G106300 Sobic003G106300 Sobic005G075600--Sobic003G106300 Sobic005G134600 Sobic005G134600 Sobic005G075600--Sobic005G134600 Sobic007G120000--Sobic001G218500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic009G084300 Sobic009G084300 Sobic007G120000--Sobic009G084300 Sobic007G120000--Sobic005G075600 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic007G120000--Sobic001G067800 Sobic007G120000--Sobic005G134600 Sobic010G126900--Sobic005G075600 Sobic004G008900 Sobic004G008900 Sobic010G126900--Sobic004G008900 Sobic002G013000 Sobic002G013000 Sobic010G126900--Sobic002G013000 Sobic010G126900--Sobic001G326400 Sobic003G204400 Sobic003G204400 Sobic010G126900--Sobic003G204400 Sobic010G126800 Sobic010G126800 Sobic010G126900--Sobic010G126800 Sobic010G126900--Sobic003G020500 Sobic010G126900--Sobic001G218500 Sobic002G193900 Sobic002G193900 Sobic010G126900--Sobic002G193900 Sobic007G119800--Sobic003G017601 Sobic007G119800--Sobic001G218500 Sobic004G161900 Sobic004G161900 Sobic007G119800--Sobic004G161900 Sobic007G119800--Sobic007G120000 Sobic007G119800--Sobic005G075600 Sobic007G119800--Sobic003G020500 Sobic007G193200 Sobic007G193200 Sobic007G119800--Sobic007G193200 Sobic010G045400 Sobic010G045400 Sobic007G119800--Sobic010G045400 Sobic001G454900 Sobic001G454900 Sobic007G119800--Sobic001G454900 Sobic004G103400--Sobic005G075600 Sobic005G092000 Sobic005G092000 Sobic004G103400--Sobic005G092000 Sobic006G075600 Sobic006G075600 Sobic004G103400--Sobic006G075600 Sobic007G221100 Sobic007G221100 Sobic004G103400--Sobic007G221100 Sobic006G191100 Sobic006G191100 Sobic004G103400--Sobic006G191100 Sobic004G103400--Sobic007G119800 Sobic004G103400--Sobic003G017601 Sobic001G260600 Sobic001G260600 Sobic004G103400--Sobic001G260600 Sobic004G103400--Sobic001G454900 Sobic004G153100--Sobic005G075600 Sobic004G153100--Sobic003G106300 Sobic004G153100--Sobic003G020500 Sobic004G153100--Sobic007G120000 Sobic007G021200 Sobic007G021200 Sobic004G153100--Sobic007G021200 Sobic005G069332 Sobic005G069332 Sobic004G153100--Sobic005G069332 Sobic004G261500 Sobic004G261500 Sobic004G153100--Sobic004G261500 Sobic004G299500 Sobic004G299500 Sobic004G153100--Sobic004G299500 Sobic004G153100--Sobic007G193200 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic003G079100 Sobic003G079100 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic002G391300 Sobic002G391300 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic003G020500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic003G020500--Sobic002G029500 Sobic003G106300--Sobic007G120000 Sobic003G106300--Sobic001G218500 Sobic007G214500 Sobic007G214500 Sobic003G106300--Sobic007G214500 Sobic003G106300--Sobic003G020500 Sobic003G106300--Sobic007G021200 Sobic003G106300--Sobic007G193200 Sobic003G106300--Sobic005G075600 Sobic003G106300--Sobic003G079100 Sobic003G106300--Sobic009G084300 Sobic005G134600--Sobic003G017601 Sobic005G134600--Sobic001G067800 Sobic005G134600--Sobic004G161900 Sobic005G134600--Sobic001G218500 Sobic003G287450 Sobic003G287450 Sobic005G134600--Sobic003G287450 Sobic005G134600--Sobic007G120000 Sobic004G106300 Sobic004G106300 Sobic005G134600--Sobic004G106300 Sobic003G287400 Sobic003G287400 Sobic005G134600--Sobic003G287400 Sobic006G230300 Sobic006G230300 Sobic005G134600--Sobic006G230300
Octagon: transcription factors


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