Gene annotation
Transcriptome id Sobic.004G103400.1
Synonym RLP53, AtRLP53
Functional annotation verticillium wilt disease resistance protein, putative, expressed
UniProt C5XYM2
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF22
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G11010 : receptor like protein 34
RAP-DB (Rice) LOC_Os01g04070.1 : verticillium wilt disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a020039
Brachypodium PNT73644
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G075600 rp3 protein, putative, expressed -
2 Sobic.005G092000 resistance protein, putative, expressed -
3 Sobic.006G075600 WD-40 repeat family protein, putative, expressed -
4 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
5 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.003G017601 - -
8 Sobic.001G260600 expressed protein -
9 Sobic.001G454900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
10 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
11 Sobic.002G081800 RGH1A, putative, expressed -
12 Sobic.010G122000 serine threonine kinase, putative, expressed -
13 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
14 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
15 Sobic.010G192432 - K14431: transcription factor TGA
16 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
17 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
18 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
19 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
20 Sobic.001G218500 MATH domain containing protein, expressed -


Gene co-expression network
sample Sobic004G103400 Sobic004G103400 Sobic005G075600 Sobic005G075600 Sobic004G103400--Sobic005G075600 Sobic005G092000 Sobic005G092000 Sobic004G103400--Sobic005G092000 Sobic006G075600 Sobic006G075600 Sobic004G103400--Sobic006G075600 Sobic007G221100 Sobic007G221100 Sobic004G103400--Sobic007G221100 Sobic006G191100 Sobic006G191100 Sobic004G103400--Sobic006G191100 Sobic007G119800 Sobic007G119800 Sobic004G103400--Sobic007G119800 Sobic003G017601 Sobic003G017601 Sobic004G103400--Sobic003G017601 Sobic001G260600 Sobic001G260600 Sobic004G103400--Sobic001G260600 Sobic001G454900 Sobic001G454900 Sobic004G103400--Sobic001G454900 Sobic007G120000 Sobic007G120000 Sobic005G075600--Sobic007G120000 Sobic010G126900 Sobic010G126900 Sobic005G075600--Sobic010G126900 Sobic005G075600--Sobic007G119800 Sobic005G075600--Sobic004G103400 Sobic004G153100 Sobic004G153100 Sobic005G075600--Sobic004G153100 Sobic001G218500 Sobic001G218500 Sobic005G075600--Sobic001G218500 Sobic003G020500 Sobic003G020500 Sobic005G075600--Sobic003G020500 Sobic003G106300 Sobic003G106300 Sobic005G075600--Sobic003G106300 Sobic005G134600 Sobic005G134600 Sobic005G075600--Sobic005G134600 Sobic010G035900 Sobic010G035900 Sobic005G092000--Sobic010G035900 Sobic002G081800 Sobic002G081800 Sobic005G092000--Sobic002G081800 Sobic005G022200 Sobic005G022200 Sobic005G092000--Sobic005G022200 Sobic002G081850 Sobic002G081850 Sobic005G092000--Sobic002G081850 Sobic007G172500 Sobic007G172500 Sobic005G092000--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic005G092000--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic005G092000--Sobic004G172100 Sobic004G339800 Sobic004G339800 Sobic005G092000--Sobic004G339800 Sobic007G009500 Sobic007G009500 Sobic005G092000--Sobic007G009500 Sobic004G161900 Sobic004G161900 Sobic006G075600--Sobic004G161900 Sobic003G287400 Sobic003G287400 Sobic006G075600--Sobic003G287400 Sobic006G075600--Sobic003G017601 Sobic003G368000 Sobic003G368000 Sobic006G075600--Sobic003G368000 Sobic003G045900 Sobic003G045900 Sobic006G075600--Sobic003G045900 Sobic010G045400 Sobic010G045400 Sobic006G075600--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic006G075600--Sobic008G037900 Sobic003G287450 Sobic003G287450 Sobic006G075600--Sobic003G287450 Sobic006G075600--Sobic007G221100 Sobic002G242500 Sobic002G242500 Sobic007G221100--Sobic002G242500 Sobic001G049200 Sobic001G049200 Sobic007G221100--Sobic001G049200 Sobic003G273700 Sobic003G273700 Sobic007G221100--Sobic003G273700 Sobic009G179200 Sobic009G179200 Sobic007G221100--Sobic009G179200 Sobic001G456100 Sobic001G456100 Sobic007G221100--Sobic001G456100 Sobic010G192432 Sobic010G192432 Sobic007G221100--Sobic010G192432 Sobic007G221100--Sobic006G191100 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic005G195600 Sobic005G195600 Sobic006G191100--Sobic005G195600 Sobic006G087900 Sobic006G087900 Sobic006G191100--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic006G191100--Sobic006G076201 Sobic002G362900 Sobic002G362900 Sobic006G191100--Sobic002G362900 Sobic010G069900 Sobic010G069900 Sobic006G191100--Sobic010G069900 Sobic003G016600 Sobic003G016600 Sobic006G191100--Sobic003G016600 Sobic003G227700 Sobic003G227700 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic006G191100--Sobic007G221100 Sobic007G119800--Sobic003G017601 Sobic007G119800--Sobic001G218500 Sobic007G119800--Sobic004G161900 Sobic007G119800--Sobic007G120000 Sobic007G119800--Sobic005G075600 Sobic007G119800--Sobic003G020500 Sobic007G193200 Sobic007G193200 Sobic007G119800--Sobic007G193200 Sobic007G119800--Sobic010G045400 Sobic007G119800--Sobic001G454900 Sobic003G017601--Sobic001G218500 Sobic001G342000 Sobic001G342000 Sobic003G017601--Sobic001G342000 Sobic002G183750 Sobic002G183750 Sobic003G017601--Sobic002G183750 Sobic002G111900 Sobic002G111900 Sobic003G017601--Sobic002G111900 Sobic003G079100 Sobic003G079100 Sobic003G017601--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic003G017601--Sobic010G213600 Sobic003G017601--Sobic003G020500 Sobic005G223700 Sobic005G223700 Sobic003G017601--Sobic005G223700 Sobic005G175900 Sobic005G175900 Sobic003G017601--Sobic005G175900 Sobic001G260600--Sobic004G103400 Sobic001G260600--Sobic010G192432 Sobic003G389000 Sobic003G389000 Sobic001G260600--Sobic003G389000 Sobic001G260600--Sobic007G221100 Sobic001G260600--Sobic001G218500 Sobic001G260600--Sobic003G287450 Sobic001G260600--Sobic003G273700 Sobic001G277500 Sobic001G277500 Sobic001G260600--Sobic001G277500 Sobic004G312200 Sobic004G312200 Sobic001G260600--Sobic004G312200 Sobic006G097900 Sobic006G097900 Sobic001G454900--Sobic006G097900 Sobic010G268700 Sobic010G268700 Sobic001G454900--Sobic010G268700 Sobic010G152500 Sobic010G152500 Sobic001G454900--Sobic010G152500 Sobic007G111800 Sobic007G111800 Sobic001G454900--Sobic007G111800 Sobic006G085700 Sobic006G085700 Sobic001G454900--Sobic006G085700 Sobic004G009200 Sobic004G009200 Sobic001G454900--Sobic004G009200 Sobic001G454900--Sobic007G193200 Sobic003G382200 Sobic003G382200 Sobic001G454900--Sobic003G382200 Sobic002G391900 Sobic002G391900 Sobic001G454900--Sobic002G391900
Octagon: transcription factors


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