Gene annotation
Transcriptome id Sobic.007G193200.1
Synonym ATMTN1, MTAN1, MTN1, ATMTAN1, Sb07g026190
Functional annotation MTA/SAH nucleosidase, putative, expressed
UniProt C5YHS5
Pfam PF01048
Panther DB PTHR21234 PTHR21234:SF16
NCBI CDD -
KEGG Orthology K01244; 5'-methylthioadenosine nucleosidase
Gene Ontology GO:0009116; nucleoside metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G38800 : methylthioadenosine nucleosidase 1
RAP-DB (Rice) LOC_Os06g02220.1 : MTA/SAH nucleosidase, putative, expressed
MaizeGDB (Corn) Zm00025a030404 , Zm00025a005263
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G193200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
2 Sobic.004G079900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
3 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
4 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
6 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
7 Sobic.001G454900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
8 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
10 Sobic.009G065700 - -
11 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
12 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
13 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
15 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
18 Sobic.004G121600 expansin precursor, putative, expressed -
19 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G193200 Sobic007G193200 Sobic004G261500 Sobic004G261500 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic003G154500 Sobic003G154500 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic005G033000 Sobic005G033000 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic001G395900 Sobic001G395900 Sobic004G261500--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic004G261500--Sobic005G101000 Sobic006G230100 Sobic006G230100 Sobic004G261500--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic004G261500--Sobic004G299500 Sobic008G058600 Sobic008G058600 Sobic004G261500--Sobic008G058600 Sobic007G202480 Sobic007G202480 Sobic004G261500--Sobic007G202480 Sobic006G230200 Sobic006G230200 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic004G261500--Sobic003G154500 Sobic004G079900--Sobic001G153100 Sobic004G079900--Sobic004G261500 Sobic004G079900--Sobic008G058600 Sobic006G047200 Sobic006G047200 Sobic004G079900--Sobic006G047200 Sobic009G065700 Sobic009G065700 Sobic004G079900--Sobic009G065700 Sobic004G079900--Sobic005G101000 Sobic006G171100 Sobic006G171100 Sobic004G079900--Sobic006G171100 Sobic004G079900--Sobic001G181600 Sobic010G010000 Sobic010G010000 Sobic004G079900--Sobic010G010000 Sobic001G181600--Sobic003G154500 Sobic001G181600--Sobic005G119900 Sobic003G441700 Sobic003G441700 Sobic001G181600--Sobic003G441700 Sobic006G097900 Sobic006G097900 Sobic001G181600--Sobic006G097900 Sobic001G181600--Sobic001G218400 Sobic009G055300 Sobic009G055300 Sobic001G181600--Sobic009G055300 Sobic007G212000 Sobic007G212000 Sobic001G181600--Sobic007G212000 Sobic001G181600--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic001G181600--Sobic007G015000 Sobic003G154500--Sobic001G181600 Sobic003G154500--Sobic005G119900 Sobic003G154500--Sobic001G395900 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic003G154500--Sobic009G055300 Sobic003G154500--Sobic006G230100 Sobic003G154500--Sobic001G218400 Sobic003G154500--Sobic004G261500 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G218400--Sobic001G181600 Sobic001G218400--Sobic003G441800 Sobic010G191600 Sobic010G191600 Sobic001G218400--Sobic010G191600 Sobic001G218400--Sobic003G154500 Sobic001G218400--Sobic003G441700 Sobic001G218400--Sobic010G010000 Sobic001G218400--Sobic005G119900 Sobic010G097200 Sobic010G097200 Sobic005G033000--Sobic010G097200 Sobic005G033000--Sobic003G154500 Sobic005G033000--Sobic004G261500 Sobic005G033000--Sobic009G065700 Sobic005G033000--Sobic001G218400 Sobic001G414800 Sobic001G414800 Sobic005G033000--Sobic001G414800 Sobic002G096000 Sobic002G096000 Sobic005G033000--Sobic002G096000 Sobic005G033000--Sobic004G079900 Sobic001G499900 Sobic001G499900 Sobic005G033000--Sobic001G499900 Sobic001G454900--Sobic006G097900 Sobic010G268700 Sobic010G268700 Sobic001G454900--Sobic010G268700 Sobic010G152500 Sobic010G152500 Sobic001G454900--Sobic010G152500 Sobic007G111800 Sobic007G111800 Sobic001G454900--Sobic007G111800 Sobic006G085700 Sobic006G085700 Sobic001G454900--Sobic006G085700 Sobic004G009200 Sobic004G009200 Sobic001G454900--Sobic004G009200 Sobic001G454900--Sobic007G193200 Sobic003G382200 Sobic003G382200 Sobic001G454900--Sobic003G382200 Sobic002G391900 Sobic002G391900 Sobic001G454900--Sobic002G391900 Sobic005G119900--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic005G119900--Sobic001G301000 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic003G053200 Sobic003G053200 Sobic005G119900--Sobic003G053200 Sobic005G119900--Sobic003G154500 Sobic005G119900--Sobic009G055300 Sobic001G231800 Sobic001G231800 Sobic005G119900--Sobic001G231800 Sobic003G441800--Sobic003G053200 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic006G205700 Sobic006G205700 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G441800--Sobic007G037600 Sobic003G441800--Sobic009G065700
Octagon: transcription factors


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