Gene annotation
Transcriptome id Sobic.001G260600.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S7H7
Pfam -
Panther DB PTHR34206 PTHR34206:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14280 : -
RAP-DB (Rice) LOC_Os10g25150.1 : expressed protein
MaizeGDB (Corn) Zm00025a034379
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
2 Sobic.010G192432 - K14431: transcription factor TGA
3 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
4 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
5 Sobic.001G218500 MATH domain containing protein, expressed -
6 Sobic.003G287450 - -
7 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.001G277500 TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
10 Sobic.005G110490 - -
11 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.005G219600 protein kinase domain containing protein, expressed -
13 Sobic.004G106300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
14 Sobic.006G003600 transporter family protein, putative, expressed -
15 Sobic.008G033700 pleiotropic drug resistance protein 15, putative, expressed -
16 Sobic.001G239200 hsp20/alpha crystallin family protein, putative, expressed -
17 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
18 Sobic.007G090472 - -
19 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
20 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -


Gene co-expression network
sample Sobic001G260600 Sobic001G260600 Sobic004G103400 Sobic004G103400 Sobic001G260600--Sobic004G103400 Sobic010G192432 Sobic010G192432 Sobic001G260600--Sobic010G192432 Sobic003G389000 Sobic003G389000 Sobic001G260600--Sobic003G389000 Sobic007G221100 Sobic007G221100 Sobic001G260600--Sobic007G221100 Sobic001G218500 Sobic001G218500 Sobic001G260600--Sobic001G218500 Sobic003G287450 Sobic003G287450 Sobic001G260600--Sobic003G287450 Sobic003G273700 Sobic003G273700 Sobic001G260600--Sobic003G273700 Sobic001G277500 Sobic001G277500 Sobic001G260600--Sobic001G277500 Sobic004G312200 Sobic004G312200 Sobic001G260600--Sobic004G312200 Sobic005G075600 Sobic005G075600 Sobic004G103400--Sobic005G075600 Sobic005G092000 Sobic005G092000 Sobic004G103400--Sobic005G092000 Sobic006G075600 Sobic006G075600 Sobic004G103400--Sobic006G075600 Sobic004G103400--Sobic007G221100 Sobic006G191100 Sobic006G191100 Sobic004G103400--Sobic006G191100 Sobic007G119800 Sobic007G119800 Sobic004G103400--Sobic007G119800 Sobic003G017601 Sobic003G017601 Sobic004G103400--Sobic003G017601 Sobic004G103400--Sobic001G260600 Sobic001G454900 Sobic001G454900 Sobic004G103400--Sobic001G454900 Sobic010G192366 Sobic010G192366 Sobic010G192432--Sobic010G192366 Sobic004G078800 Sobic004G078800 Sobic010G192432--Sobic004G078800 Sobic003G227700 Sobic003G227700 Sobic010G192432--Sobic003G227700 Sobic001G483600 Sobic001G483600 Sobic010G192432--Sobic001G483600 Sobic001G067100 Sobic001G067100 Sobic010G192432--Sobic001G067100 Sobic006G135300 Sobic006G135300 Sobic010G192432--Sobic006G135300 Sobic010G097200 Sobic010G097200 Sobic010G192432--Sobic010G097200 Sobic010G071400 Sobic010G071400 Sobic010G192432--Sobic010G071400 Sobic007G100700 Sobic007G100700 Sobic010G192432--Sobic007G100700 Sobic002G101400 Sobic002G101400 Sobic003G389000--Sobic002G101400 Sobic010G113100 Sobic010G113100 Sobic003G389000--Sobic010G113100 Sobic003G203600 Sobic003G203600 Sobic003G389000--Sobic003G203600 Sobic002G216100 Sobic002G216100 Sobic003G389000--Sobic002G216100 Sobic003G389000--Sobic001G067100 Sobic002G185800 Sobic002G185800 Sobic003G389000--Sobic002G185800 Sobic006G092700 Sobic006G092700 Sobic003G389000--Sobic006G092700 Sobic007G057400 Sobic007G057400 Sobic003G389000--Sobic007G057400 Sobic007G073000 Sobic007G073000 Sobic003G389000--Sobic007G073000 Sobic002G242500 Sobic002G242500 Sobic007G221100--Sobic002G242500 Sobic001G049200 Sobic001G049200 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic009G179200 Sobic009G179200 Sobic007G221100--Sobic009G179200 Sobic001G456100 Sobic001G456100 Sobic007G221100--Sobic001G456100 Sobic007G221100--Sobic010G192432 Sobic007G221100--Sobic006G191100 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic003G020500 Sobic003G020500 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic003G079100 Sobic003G079100 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic002G259100 Sobic002G259100 Sobic003G287450--Sobic002G259100 Sobic001G503000 Sobic001G503000 Sobic003G287450--Sobic001G503000 Sobic005G115300 Sobic005G115300 Sobic003G287450--Sobic005G115300 Sobic003G287450--Sobic004G312200 Sobic006G009700 Sobic006G009700 Sobic003G287450--Sobic006G009700 Sobic005G071900 Sobic005G071900 Sobic003G287450--Sobic005G071900 Sobic003G287450--Sobic001G218500 Sobic004G312500 Sobic004G312500 Sobic003G287450--Sobic004G312500 Sobic003G287400 Sobic003G287400 Sobic003G287450--Sobic003G287400 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic003G273700--Sobic007G221100 Sobic003G273700--Sobic003G389000 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic010G028100 Sobic010G028100 Sobic001G277500--Sobic010G028100 Sobic010G070400 Sobic010G070400 Sobic001G277500--Sobic010G070400 Sobic003G000100 Sobic003G000100 Sobic001G277500--Sobic003G000100 Sobic010G082000 Sobic010G082000 Sobic001G277500--Sobic010G082000 Sobic001G277500--Sobic006G092700 Sobic007G014200 Sobic007G014200 Sobic001G277500--Sobic007G014200 Sobic006G031100 Sobic006G031100 Sobic001G277500--Sobic006G031100 Sobic006G003600 Sobic006G003600 Sobic001G277500--Sobic006G003600 Sobic006G196400 Sobic006G196400 Sobic001G277500--Sobic006G196400 Sobic004G312200--Sobic005G115300 Sobic004G312200--Sobic001G503000 Sobic004G312200--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic004G312200--Sobic005G175900 Sobic004G312200--Sobic010G082000 Sobic003G185300 Sobic003G185300 Sobic004G312200--Sobic003G185300 Sobic001G263300 Sobic001G263300 Sobic004G312200--Sobic001G263300 Sobic003G215300 Sobic003G215300 Sobic004G312200--Sobic003G215300 Sobic001G149400 Sobic001G149400 Sobic004G312200--Sobic001G149400
Octagon: transcription factors


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