Gene annotation
Transcriptome id Sobic.001G277500.2
Synonym Sb01g027360, CRK23
Functional annotation TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5WPY7
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF71
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23310 : cysteine-rich RLK (RECEPTOR-like protein kinase) 23
RAP-DB (Rice) LOC_Os10g04730.1 : TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a003635 , Zm00025a003633
Brachypodium PNT76078 , PNT76083 , PNT76082 , PNT76081 , PNT76084 , KQJ81933 , KQJ81932 , KQJ81935 , KQJ81934 , KQJ81936 , KQJ81939 , PNT76601 , PNT76602 , KQJ87918 , PNT60746 , PNT60747 , PNT60749 , PNT60748
Barley HORVU3Hr1G109370.9 , HORVU3Hr1G109370.8 , HORVU3Hr1G109370.13 , HORVU3Hr1G109370.11 , HORVU3Hr1G109370.16 , HORVU3Hr1G109370.15 , HORVU3Hr1G109370.14 , HORVU3Hr1G109370.18 , HORVU3Hr1G109370.31 , HORVU3Hr1G109370.32 , HORVU3Hr1G006790.3 , HORVU3Hr1G006790.2 , HORVU3Hr1G006790.1 , HORVU3Hr1G006790.6 , HORVU3Hr1G006790.5 , HORVU3Hr1G006790.4 , HORVU3Hr1G109350.1 , HORVU3Hr1G109350.3 , HORVU3Hr1G109350.2 , HORVU3Hr1G109350.5 , HORVU3Hr1G109350.4 , HORVU3Hr1G109350.6 , HORVU3Hr1G006640.8 , HORVU3Hr1G006620.13 , HORVU3Hr1G006620.12 , HORVU3Hr1G006620.11 , HORVU3Hr1G006620.15 , HORVU3Hr1G109370.29 , HORVU3Hr1G109370.22 , HORVU3Hr1G109370.23 , HORVU3Hr1G109370.24 , HORVU3Hr1G006620.9 , HORVU3Hr1G006620.8 , HORVU3Hr1G006620.3 , HORVU3Hr1G006620.2 , HORVU3Hr1G006620.1 , HORVU3Hr1G006620.7 , HORVU3Hr1G006620.6 , HORVU3Hr1G006620.5 , HORVU3Hr1G006620.4 , HORVU3Hr1G006640.5 , HORVU3Hr1G006640.4 , HORVU3Hr1G006640.7 , HORVU3Hr1G006640.6 , HORVU3Hr1G006640.1 , HORVU3Hr1G006640.3 , HORVU3Hr1G006640.2 , HORVU3Hr1G006620.10 , HORVU3Hr1G006620.14 , HORVU3Hr1G006800.5 , HORVU3Hr1G006800.4 , HORVU3Hr1G006800.3 , HORVU3Hr1G006800.2 , HORVU3Hr1G006800.1 , HORVU2Hr1G044680.14 , HORVU2Hr1G044680.12 , HORVU2Hr1G044680.13 , HORVU3Hr1G109370.5 , HORVU3Hr1G109370.4 , HORVU3Hr1G109370.17 , HORVU2Hr1G044680.2
Wheat TraesCSU02G010800 , TraesCSU02G182500 , TraesCSU02G247300 , TraesCS3B02G043700 , TraesCS3A02G039400 , TraesCS3A02G039100 , TraesCS7D02G079100 , TraesCS3A02G039500 , TraesCS2B02G242100 , TraesCS2B02G242100 , TraesCS2B02G242100 , TraesCS6A02G294700 , TraesCS3B02G555500 , TraesCS3B02G555500 , TraesCS3B02G044000 , TraesCS3B02G044200 , TraesCS4A02G323500 , TraesCS4A02G323500 , TraesCS3D02G040300 , TraesCS7A02G032600 , TraesCS3A02G494100 , TraesCS3A02G493900 , TraesCS3D02G501100 , TraesCS3D02G501100 , TraesCS4A02G457000 , TraesCS3B02G044100 , TraesCS5B02G554900 , TraesCSU02G207400 , TraesCS7D02G029200 , TraesCS3A02G039300 , TraesCS7A02G044500 , TraesCSU02G011500 , TraesCS6A02G294500 , TraesCS3D02G501400 , TraesCS3A02G039200 , TraesCS3A02G493500 , TraesCS3A02G493500 , TraesCS7D02G099200 , TraesCS3A02G493800 , TraesCS4A02G383000 , TraesCS2D02G003900 , TraesCS7D02G099200 , TraesCS3D02G040800 , TraesCS3D02G040800 , TraesCS3D02G040600 , TraesCS7A02G105100 , TraesCS2D02G003800 , TraesCS7D02G099300 , TraesCS3D02G040700 , TraesCS2A02G216700
Populus PNT11650 , PNT39261 , PNT11629 , PNT11621 , PNT11639 , PNT11633 , PNT11631 , PNT11630 , PNT11634 , PNT11667 , PNT11662


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
2 Sobic.010G070400 DNA binding protein, putative, expressed -
3 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
4 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
5 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.007G014200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
8 Sobic.006G003600 transporter family protein, putative, expressed -
9 Sobic.006G196400 U-box, putative, expressed -
10 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
13 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
14 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
15 Sobic.003G240400 leaf senescence related protein, putative, expressed -
16 Sobic.002G183750 - -
17 Sobic.010G152400 glycosyltransferase, putative, expressed -
18 Sobic.002G391900 peroxidase precursor, putative, expressed -
19 Sobic.004G322000 hypro1, putative, expressed -
20 Sobic.005G175900 expressed protein -


Gene co-expression network
sample Sobic001G277500 Sobic001G277500 Sobic010G028100 Sobic010G028100 Sobic001G277500--Sobic010G028100 Sobic010G070400 Sobic010G070400 Sobic001G277500--Sobic010G070400 Sobic003G000100 Sobic003G000100 Sobic001G277500--Sobic003G000100 Sobic010G082000 Sobic010G082000 Sobic001G277500--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic001G277500--Sobic006G092700 Sobic007G014200 Sobic007G014200 Sobic001G277500--Sobic007G014200 Sobic006G031100 Sobic006G031100 Sobic001G277500--Sobic006G031100 Sobic006G003600 Sobic006G003600 Sobic001G277500--Sobic006G003600 Sobic006G196400 Sobic006G196400 Sobic001G277500--Sobic006G196400 Sobic010G028100--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic010G028100--Sobic006G135300 Sobic010G028100--Sobic003G000100 Sobic007G090472 Sobic007G090472 Sobic010G028100--Sobic007G090472 Sobic010G028100--Sobic010G082000 Sobic002G146000 Sobic002G146000 Sobic010G028100--Sobic002G146000 Sobic010G113100 Sobic010G113100 Sobic010G028100--Sobic010G113100 Sobic010G028100--Sobic006G003600 Sobic003G182200 Sobic003G182200 Sobic010G028100--Sobic003G182200 Sobic004G029300 Sobic004G029300 Sobic010G070400--Sobic004G029300 Sobic010G070400--Sobic007G014200 Sobic003G215300 Sobic003G215300 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic005G175900 Sobic005G175900 Sobic010G070400--Sobic005G175900 Sobic010G070400--Sobic003G000100 Sobic010G070400--Sobic001G277500 Sobic007G090600 Sobic007G090600 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic010G152400 Sobic010G152400 Sobic003G000100--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic004G306900 Sobic004G306900 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic004G106100 Sobic004G106100 Sobic003G000100--Sobic004G106100 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic006G019700 Sobic006G019700 Sobic010G082000--Sobic006G019700 Sobic007G073000 Sobic007G073000 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700 Sobic007G014200--Sobic010G070400 Sobic007G014200--Sobic005G175900 Sobic007G014200--Sobic001G277500 Sobic001G263300 Sobic001G263300 Sobic007G014200--Sobic001G263300 Sobic007G014200--Sobic006G031100 Sobic007G014200--Sobic003G215300 Sobic010G191600 Sobic010G191600 Sobic007G014200--Sobic010G191600 Sobic007G014200--Sobic004G106100 Sobic007G014200--Sobic007G090600 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic002G029600 Sobic002G029600 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic004G322000 Sobic004G322000 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic006G003600--Sobic006G092700 Sobic006G003600--Sobic010G028100 Sobic006G003600--Sobic010G082000 Sobic008G164450 Sobic008G164450 Sobic006G003600--Sobic008G164450 Sobic004G119800 Sobic004G119800 Sobic006G003600--Sobic004G119800 Sobic006G003600--Sobic006G135300 Sobic001G360500 Sobic001G360500 Sobic006G003600--Sobic001G360500 Sobic004G333000 Sobic004G333000 Sobic006G003600--Sobic004G333000 Sobic006G003600--Sobic002G146000 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic002G115600 Sobic002G115600 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.