Gene annotation
Transcriptome id Sobic.007G014200.1
Synonym Sb07g001280
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peroxidase precursor, putative, expressed
UniProt C5YLZ0
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF22
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G33420 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os08g02110.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a054380 , Zm00025a048553 , Zm00025a048929 , Zm00025a040226 , Zm00025a011430 , Zm00025a025893 , Zm00025a015271 , Zm00025a049143 , Zm00025a049141 , Zm00025a011084 , Zm00025a056040 , Zm00025a044121
Brachypodium PNT65315 , KQK03846 , KQJ82616 , KQK14990 , KQK15992 , KQK16275 , KQK18502 , PNT66525 , PNT66526 , KQK01984 , KQK04369
Barley HORVU7Hr1G089480.2 , HORVU7Hr1G089480.3 , HORVU7Hr1G089480.1 , HORVU7Hr1G089480.4 , HORVU7Hr1G013470.1 , HORVU6Hr1G026230.5 , HORVU6Hr1G026230.4 , HORVU6Hr1G026230.2 , HORVU6Hr1G026230.1 , HORVU7Hr1G093400.1 , HORVU7Hr1G093400.2 , HORVU7Hr1G098110.8 , HORVU7Hr1G098110.6 , HORVU7Hr1G098110.7 , HORVU7Hr1G098110.5 , HORVU7Hr1G098110.2 , HORVU7Hr1G098110.1 , HORVU7Hr1G098110.4 , HORVU3Hr1G112040.1 , HORVU7Hr1G098110.3
Wheat TraesCS3D02G517000 , TraesCS1B02G115900 , TraesCS1A02G104300 , TraesCS7A02G424100 , TraesCS1B02G365300 , TraesCS5D02G144300 , TraesCS5D02G144300 , TraesCS1D02G354100 , TraesCS2B02G317200 , TraesCS7D02G417400 , TraesCS5A02G148600 , TraesCS7B02G325800 , TraesCS1D02G096400 , TraesCS2D02G299700 , TraesCS2A02G301000 , TraesCS2D02G153800 , TraesCS1D02G402200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G070400 DNA binding protein, putative, expressed -
2 Sobic.005G175900 expressed protein -
3 Sobic.001G277500 TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
5 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
6 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
7 Sobic.010G191600 cytochrome P450, putative, expressed -
8 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
10 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
12 Sobic.006G196400 U-box, putative, expressed -
13 Sobic.005G217766 - -
14 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
15 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G271800 WRKY66, expressed -
17 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
18 Sobic.001G169400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
20 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic007G014200 Sobic007G014200 Sobic010G070400 Sobic010G070400 Sobic007G014200--Sobic010G070400 Sobic005G175900 Sobic005G175900 Sobic007G014200--Sobic005G175900 Sobic001G277500 Sobic001G277500 Sobic007G014200--Sobic001G277500 Sobic001G263300 Sobic001G263300 Sobic007G014200--Sobic001G263300 Sobic006G031100 Sobic006G031100 Sobic007G014200--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic007G014200--Sobic003G215300 Sobic010G191600 Sobic010G191600 Sobic007G014200--Sobic010G191600 Sobic004G106100 Sobic004G106100 Sobic007G014200--Sobic004G106100 Sobic007G090600 Sobic007G090600 Sobic007G014200--Sobic007G090600 Sobic004G029300 Sobic004G029300 Sobic010G070400--Sobic004G029300 Sobic010G070400--Sobic007G014200 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic010G070400--Sobic005G175900 Sobic003G000100 Sobic003G000100 Sobic010G070400--Sobic003G000100 Sobic010G070400--Sobic001G277500 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic005G175900--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic005G175900--Sobic006G196400 Sobic002G115600 Sobic002G115600 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic010G082000 Sobic010G082000 Sobic005G175900--Sobic010G082000 Sobic003G240400 Sobic003G240400 Sobic005G175900--Sobic003G240400 Sobic010G028100 Sobic010G028100 Sobic001G277500--Sobic010G028100 Sobic001G277500--Sobic010G070400 Sobic001G277500--Sobic003G000100 Sobic001G277500--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic001G277500--Sobic006G092700 Sobic001G277500--Sobic007G014200 Sobic001G277500--Sobic006G031100 Sobic006G003600 Sobic006G003600 Sobic001G277500--Sobic006G003600 Sobic001G277500--Sobic006G196400 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic002G029600 Sobic002G029600 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic005G217766 Sobic005G217766 Sobic010G191600--Sobic005G217766 Sobic005G097400 Sobic005G097400 Sobic010G191600--Sobic005G097400 Sobic002G111900 Sobic002G111900 Sobic010G191600--Sobic002G111900 Sobic002G391400 Sobic002G391400 Sobic010G191600--Sobic002G391400 Sobic010G191600--Sobic006G205700 Sobic001G218400 Sobic001G218400 Sobic010G191600--Sobic001G218400 Sobic010G191700 Sobic010G191700 Sobic010G191600--Sobic010G191700 Sobic003G441800 Sobic003G441800 Sobic010G191600--Sobic003G441800 Sobic007G206800 Sobic007G206800 Sobic010G191600--Sobic007G206800 Sobic007G086300 Sobic007G086300 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G306900 Sobic004G306900 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic010G152400 Sobic010G152400 Sobic004G106100--Sobic010G152400 Sobic007G090600--Sobic006G031100 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.