Gene annotation
Transcriptome id Sobic.003G273700.2
Synonym Sb03g032570
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
uncharacterized protein PA4923, putative, expressed
UniProt A0A1W0VZ71
Pfam PF03641
Panther DB PTHR31223 PTHR31223:SF4
NCBI CDD -
KEGG Orthology K06966; pyrimidine/purine-5'-nucleotide nucleosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11950 : Putative lysine decarboxylase family protein
RAP-DB (Rice) LOC_Os01g51210.1 : uncharacterized protein PA4923, putative, expressed
MaizeGDB (Corn) Zm00025a027833
Brachypodium KQK09417 , KQK09419 , KQK09418
Barley HORVU3Hr1G066810.10 , HORVU3Hr1G066810.11 , HORVU3Hr1G066810.12 , HORVU3Hr1G066810.13 , HORVU3Hr1G066810.14 , HORVU3Hr1G066810.15 , HORVU3Hr1G066810.16 , HORVU3Hr1G066810.2 , HORVU3Hr1G066810.3 , HORVU3Hr1G066810.1 , HORVU3Hr1G066810.6 , HORVU3Hr1G066810.7 , HORVU3Hr1G066810.4 , HORVU3Hr1G066810.5 , HORVU3Hr1G066810.8 , HORVU3Hr1G066810.9
Wheat TraesCS3B02G281000 , TraesCS3D02G251900
Populus PNT46885 , PNT46886 , PNT51975


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
2 Sobic.010G192432 - K14431: transcription factor TGA
3 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
5 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
7 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
8 Sobic.001G456100 integral membrane protein, putative, expressed -
9 Sobic.010G161450 - -
10 Sobic.001G227850 - -
11 Sobic.003G417100 esterase, putative, expressed -
12 Sobic.003G319400 receptor protein kinase, putative, expressed -
13 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
14 Sobic.009G230900 expressed protein -
15 Sobic.008G191400 expressed protein -
16 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
18 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
19 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
20 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -


Gene co-expression network
sample Sobic003G273700 Sobic003G273700 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic001G302500--Sobic003G273700 Sobic001G062500 Sobic001G062500 Sobic001G302500--Sobic001G062500 Sobic002G185800 Sobic002G185800 Sobic001G302500--Sobic002G185800 Sobic001G302500--Sobic002G283900 Sobic006G256900 Sobic006G256900 Sobic001G302500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic001G302500--Sobic009G219200 Sobic010G148800 Sobic010G148800 Sobic001G302500--Sobic010G148800 Sobic003G140700 Sobic003G140700 Sobic001G302500--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic001G302500--Sobic001G438200 Sobic010G192366 Sobic010G192366 Sobic010G192432--Sobic010G192366 Sobic004G078800 Sobic004G078800 Sobic010G192432--Sobic004G078800 Sobic003G227700 Sobic003G227700 Sobic010G192432--Sobic003G227700 Sobic001G483600 Sobic001G483600 Sobic010G192432--Sobic001G483600 Sobic001G067100 Sobic001G067100 Sobic010G192432--Sobic001G067100 Sobic006G135300 Sobic006G135300 Sobic010G192432--Sobic006G135300 Sobic010G097200 Sobic010G097200 Sobic010G192432--Sobic010G097200 Sobic010G071400 Sobic010G071400 Sobic010G192432--Sobic010G071400 Sobic007G100700 Sobic007G100700 Sobic010G192432--Sobic007G100700 Sobic003G417100 Sobic003G417100 Sobic010G194100--Sobic003G417100 Sobic010G194100--Sobic006G256900 Sobic006G274933 Sobic006G274933 Sobic010G194100--Sobic006G274933 Sobic010G194100--Sobic002G185800 Sobic004G262500 Sobic004G262500 Sobic010G194100--Sobic004G262500 Sobic003G404600 Sobic003G404600 Sobic010G194100--Sobic003G404600 Sobic001G176400 Sobic001G176400 Sobic010G194100--Sobic001G176400 Sobic003G280400 Sobic003G280400 Sobic010G194100--Sobic003G280400 Sobic010G194100--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic006G230300--Sobic001G299100 Sobic006G230300--Sobic003G417100 Sobic006G092700 Sobic006G092700 Sobic006G230300--Sobic006G092700 Sobic008G191400 Sobic008G191400 Sobic006G230300--Sobic008G191400 Sobic003G215200 Sobic003G215200 Sobic006G230300--Sobic003G215200 Sobic010G028100 Sobic010G028100 Sobic006G230300--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G230300--Sobic003G000100 Sobic006G230300--Sobic010G194100 Sobic003G017601 Sobic003G017601 Sobic006G230300--Sobic003G017601 Sobic003G231600 Sobic003G231600 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic002G283900--Sobic001G067800 Sobic002G283900--Sobic001G302500 Sobic010G218300 Sobic010G218300 Sobic002G283900--Sobic010G218300 Sobic002G283900--Sobic008G191400 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic002G242500 Sobic002G242500 Sobic007G221100--Sobic002G242500 Sobic001G049200 Sobic001G049200 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic009G179200 Sobic009G179200 Sobic007G221100--Sobic009G179200 Sobic007G221100--Sobic001G456100 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic002G101400 Sobic002G101400 Sobic003G389000--Sobic002G101400 Sobic010G113100 Sobic010G113100 Sobic003G389000--Sobic010G113100 Sobic003G203600 Sobic003G203600 Sobic003G389000--Sobic003G203600 Sobic002G216100 Sobic002G216100 Sobic003G389000--Sobic002G216100 Sobic003G389000--Sobic001G067100 Sobic003G389000--Sobic002G185800 Sobic003G389000--Sobic006G092700 Sobic007G057400 Sobic007G057400 Sobic003G389000--Sobic007G057400 Sobic007G073000 Sobic007G073000 Sobic003G389000--Sobic007G073000 Sobic001G456100--Sobic006G230300 Sobic001G456100--Sobic010G194100 Sobic001G456100--Sobic001G049200 Sobic001G456100--Sobic003G273700 Sobic001G456100--Sobic007G221100 Sobic007G157900 Sobic007G157900 Sobic001G456100--Sobic007G157900 Sobic010G193900 Sobic010G193900 Sobic001G456100--Sobic010G193900 Sobic009G238900 Sobic009G238900 Sobic001G456100--Sobic009G238900 Sobic001G456100--Sobic002G242500 Sobic010G161450--Sobic010G220600 Sobic010G161450--Sobic001G049200 Sobic001G386400 Sobic001G386400 Sobic010G161450--Sobic001G386400 Sobic006G064800 Sobic006G064800 Sobic010G161450--Sobic006G064800 Sobic010G161450--Sobic003G273700 Sobic010G161450--Sobic002G242500 Sobic007G136100 Sobic007G136100 Sobic010G161450--Sobic007G136100 Sobic003G167500 Sobic003G167500 Sobic010G161450--Sobic003G167500 Sobic010G161450--Sobic007G221100
Octagon: transcription factors


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