Gene annotation
Transcriptome id Sobic.002G283900.1
Synonym Sb02g031640
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X6Z9
Pfam PF05056
Panther DB PTHR33103 PTHR33103:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09110 : Protein of unknown function (DUF674)
RAP-DB (Rice) LOC_Os09g37260.1 : expressed protein
MaizeGDB (Corn) Zm00025a014489
Brachypodium PNT65051
Barley HORVU5Hr1G085500.1 , HORVU5Hr1G085500.3 , HORVU5Hr1G085500.2 , HORVU5Hr1G085350.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G231600 CBS domain containing membrane protein, putative, expressed -
2 Sobic.005G219600 protein kinase domain containing protein, expressed -
3 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
4 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
5 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
6 Sobic.008G191400 expressed protein -
7 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.001G227850 - -
9 Sobic.001G218500 MATH domain containing protein, expressed -
10 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
11 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
12 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
13 Sobic.009G199001 - -
14 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
16 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
17 Sobic.003G319400 receptor protein kinase, putative, expressed -
18 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
19 Sobic.009G074500 expressed protein -
20 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase


Gene co-expression network
sample Sobic002G283900 Sobic002G283900 Sobic003G231600 Sobic003G231600 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic002G283900--Sobic001G067800 Sobic001G302500 Sobic001G302500 Sobic002G283900--Sobic001G302500 Sobic010G218300 Sobic010G218300 Sobic002G283900--Sobic010G218300 Sobic008G191400 Sobic008G191400 Sobic002G283900--Sobic008G191400 Sobic003G273700 Sobic003G273700 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic001G261460 Sobic001G261460 Sobic003G231600--Sobic001G261460 Sobic003G231600--Sobic002G283900 Sobic009G221800 Sobic009G221800 Sobic003G231600--Sobic009G221800 Sobic010G113100 Sobic010G113100 Sobic003G231600--Sobic010G113100 Sobic007G047500 Sobic007G047500 Sobic003G231600--Sobic007G047500 Sobic007G100700 Sobic007G100700 Sobic003G231600--Sobic007G100700 Sobic008G011700 Sobic008G011700 Sobic003G231600--Sobic008G011700 Sobic001G067100 Sobic001G067100 Sobic003G231600--Sobic001G067100 Sobic003G426500 Sobic003G426500 Sobic003G231600--Sobic003G426500 Sobic005G219600--Sobic001G067800 Sobic005G219600--Sobic001G218500 Sobic001G239200 Sobic001G239200 Sobic005G219600--Sobic001G239200 Sobic003G020500 Sobic003G020500 Sobic005G219600--Sobic003G020500 Sobic003G255600 Sobic003G255600 Sobic005G219600--Sobic003G255600 Sobic001G274400 Sobic001G274400 Sobic005G219600--Sobic001G274400 Sobic006G135300 Sobic006G135300 Sobic005G219600--Sobic006G135300 Sobic004G271800 Sobic004G271800 Sobic005G219600--Sobic004G271800 Sobic004G322000 Sobic004G322000 Sobic005G219600--Sobic004G322000 Sobic001G067800--Sobic005G219600 Sobic001G067800--Sobic001G218500 Sobic001G067800--Sobic003G255600 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic001G067800--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic001G067800--Sobic002G029600 Sobic001G067800--Sobic003G020500 Sobic001G302500--Sobic003G273700 Sobic001G062500 Sobic001G062500 Sobic001G302500--Sobic001G062500 Sobic002G185800 Sobic002G185800 Sobic001G302500--Sobic002G185800 Sobic001G302500--Sobic002G283900 Sobic006G256900 Sobic006G256900 Sobic001G302500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic001G302500--Sobic009G219200 Sobic010G148800 Sobic010G148800 Sobic001G302500--Sobic010G148800 Sobic003G140700 Sobic003G140700 Sobic001G302500--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic001G302500--Sobic001G438200 Sobic001G460400 Sobic001G460400 Sobic010G218300--Sobic001G460400 Sobic010G218300--Sobic002G283900 Sobic004G161900 Sobic004G161900 Sobic010G218300--Sobic004G161900 Sobic010G045400 Sobic010G045400 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G218300--Sobic001G245800 Sobic001G299100 Sobic001G299100 Sobic008G191400--Sobic001G299100 Sobic006G092700 Sobic006G092700 Sobic008G191400--Sobic006G092700 Sobic003G319400 Sobic003G319400 Sobic008G191400--Sobic003G319400 Sobic008G191400--Sobic006G135300 Sobic008G191400--Sobic007G100700 Sobic008G191400--Sobic003G426500 Sobic004G306900 Sobic004G306900 Sobic008G191400--Sobic004G306900 Sobic009G181600 Sobic009G181600 Sobic008G191400--Sobic009G181600 Sobic010G082000 Sobic010G082000 Sobic008G191400--Sobic010G082000 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic001G227850--Sobic008G191400 Sobic001G227850--Sobic003G319400 Sobic001G227850--Sobic001G299100 Sobic010G031700 Sobic010G031700 Sobic001G227850--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic001G227850--Sobic005G202300 Sobic006G003100 Sobic006G003100 Sobic001G227850--Sobic006G003100 Sobic001G227850--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic001G227850--Sobic010G152400 Sobic010G097200 Sobic010G097200 Sobic001G227850--Sobic010G097200 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic001G218500--Sobic002G029600 Sobic003G017601 Sobic003G017601 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601
Octagon: transcription factors


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