Gene annotation
Transcriptome id Sobic.007G196300.1
Synonym Sb07g026480
Functional annotation ubiquitin-associated protein, putative, expressed
UniProt C5YI36
Pfam PF00627 PF09409
Panther DB PTHR13020 PTHR13020:SF33
NCBI CDD KOG2699; Predicted ubiquitin regulatory protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04850 : ubiquitin-associated (UBA)/TS-N domain-containing protein
RAP-DB (Rice) LOC_Os08g41500.1 : ubiquitin-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a030386
Brachypodium KQJ99086 , PNT68473
Barley HORVU7Hr1G053440.15 , HORVU7Hr1G053440.14 , HORVU7Hr1G053440.16 , HORVU7Hr1G053440.11 , HORVU7Hr1G053440.10 , HORVU7Hr1G053440.13 , HORVU7Hr1G053440.12 , HORVU7Hr1G053440.19 , HORVU7Hr1G053440.18 , HORVU7Hr1G053440.33 , HORVU7Hr1G053440.21 , HORVU7Hr1G053440.22 , HORVU7Hr1G053440.23 , HORVU7Hr1G053440.24 , HORVU7Hr1G053440.25 , HORVU7Hr1G053440.26 , HORVU7Hr1G053440.27 , HORVU7Hr1G053440.28 , HORVU7Hr1G053440.5 , HORVU7Hr1G053440.7 , HORVU7Hr1G053440.6 , HORVU7Hr1G053440.9 , HORVU7Hr1G053440.8
Wheat TraesCS7B02G154400 , TraesCS7D02G258300 , TraesCS7A02G257500 , TraesCS7A02G257500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
4 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
5 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
6 Sobic.003G388300 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
7 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
8 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
9 Sobic.005G152200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
10 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
11 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
12 Sobic.005G219600 protein kinase domain containing protein, expressed -
13 Sobic.002G117900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
14 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
15 Sobic.009G161401 - -
16 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
17 Sobic.003G231600 CBS domain containing membrane protein, putative, expressed -
18 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
19 Sobic.001G456100 integral membrane protein, putative, expressed -
20 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic007G196300 Sobic007G196300 Sobic002G283900 Sobic002G283900 Sobic007G196300--Sobic002G283900 Sobic005G024900 Sobic005G024900 Sobic007G196300--Sobic005G024900 Sobic003G440900 Sobic003G440900 Sobic007G196300--Sobic003G440900 Sobic004G173600 Sobic004G173600 Sobic007G196300--Sobic004G173600 Sobic003G080900 Sobic003G080900 Sobic007G196300--Sobic003G080900 Sobic003G388300 Sobic003G388300 Sobic007G196300--Sobic003G388300 Sobic007G120000 Sobic007G120000 Sobic007G196300--Sobic007G120000 Sobic003G106300 Sobic003G106300 Sobic007G196300--Sobic003G106300 Sobic005G152200 Sobic005G152200 Sobic007G196300--Sobic005G152200 Sobic003G231600 Sobic003G231600 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic002G283900--Sobic001G067800 Sobic001G302500 Sobic001G302500 Sobic002G283900--Sobic001G302500 Sobic010G218300 Sobic010G218300 Sobic002G283900--Sobic010G218300 Sobic008G191400 Sobic008G191400 Sobic002G283900--Sobic008G191400 Sobic003G273700 Sobic003G273700 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic002G087800 Sobic002G087800 Sobic005G024900--Sobic002G087800 Sobic001G132000 Sobic001G132000 Sobic005G024900--Sobic001G132000 Sobic003G061400 Sobic003G061400 Sobic005G024900--Sobic003G061400 Sobic005G024900--Sobic003G440900 Sobic003G241500 Sobic003G241500 Sobic005G024900--Sobic003G241500 Sobic004G333200 Sobic004G333200 Sobic005G024900--Sobic004G333200 Sobic006G244400 Sobic006G244400 Sobic005G024900--Sobic006G244400 Sobic005G024900--Sobic005G152200 Sobic006G127100 Sobic006G127100 Sobic005G024900--Sobic006G127100 Sobic002G117900 Sobic002G117900 Sobic003G440900--Sobic002G117900 Sobic003G440900--Sobic005G024900 Sobic002G422500 Sobic002G422500 Sobic003G440900--Sobic002G422500 Sobic003G440900--Sobic007G196300 Sobic003G440900--Sobic004G173600 Sobic003G440900--Sobic002G087800 Sobic010G193900 Sobic010G193900 Sobic003G440900--Sobic010G193900 Sobic006G247100 Sobic006G247100 Sobic003G440900--Sobic006G247100 Sobic007G136100 Sobic007G136100 Sobic003G440900--Sobic007G136100 Sobic002G114800 Sobic002G114800 Sobic004G173600--Sobic002G114800 Sobic004G173600--Sobic010G193900 Sobic001G049200 Sobic001G049200 Sobic004G173600--Sobic001G049200 Sobic010G002400 Sobic010G002400 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic003G280300 Sobic003G280300 Sobic004G173600--Sobic003G280300 Sobic006G176600 Sobic006G176600 Sobic004G173600--Sobic006G176600 Sobic001G540100 Sobic001G540100 Sobic004G173600--Sobic001G540100 Sobic004G132300 Sobic004G132300 Sobic004G173600--Sobic004G132300 Sobic003G080900--Sobic002G117900 Sobic009G084300 Sobic009G084300 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic002G155400 Sobic002G155400 Sobic003G080900--Sobic002G155400 Sobic003G080900--Sobic003G273700 Sobic004G106900 Sobic004G106900 Sobic003G080900--Sobic004G106900 Sobic003G080900--Sobic007G196300 Sobic003G388300--Sobic002G283900 Sobic003G388300--Sobic003G231600 Sobic003G388300--Sobic007G196300 Sobic003G388300--Sobic010G218300 Sobic003G201200 Sobic003G201200 Sobic003G388300--Sobic003G201200 Sobic003G388300--Sobic001G067800 Sobic010G276700 Sobic010G276700 Sobic003G388300--Sobic010G276700 Sobic009G221800 Sobic009G221800 Sobic003G388300--Sobic009G221800 Sobic003G078900 Sobic003G078900 Sobic003G388300--Sobic003G078900 Sobic007G120000--Sobic001G218500 Sobic003G020500 Sobic003G020500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic007G120000--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic007G120000--Sobic005G134600 Sobic003G106300--Sobic007G120000 Sobic003G106300--Sobic001G218500 Sobic007G214500 Sobic007G214500 Sobic003G106300--Sobic007G214500 Sobic003G106300--Sobic003G020500 Sobic007G021200 Sobic007G021200 Sobic003G106300--Sobic007G021200 Sobic007G193200 Sobic007G193200 Sobic003G106300--Sobic007G193200 Sobic003G106300--Sobic005G075600 Sobic003G079100 Sobic003G079100 Sobic003G106300--Sobic003G079100 Sobic003G106300--Sobic009G084300 Sobic002G024100 Sobic002G024100 Sobic005G152200--Sobic002G024100 Sobic005G152200--Sobic005G024900 Sobic009G172500 Sobic009G172500 Sobic005G152200--Sobic009G172500 Sobic006G096400 Sobic006G096400 Sobic005G152200--Sobic006G096400 Sobic005G152200--Sobic003G229200 Sobic005G152200--Sobic009G161401 Sobic009G210300 Sobic009G210300 Sobic005G152200--Sobic009G210300 Sobic007G078100 Sobic007G078100 Sobic005G152200--Sobic007G078100 Sobic001G010400 Sobic001G010400 Sobic005G152200--Sobic001G010400
Octagon: transcription factors


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