Gene annotation
Transcriptome id Sobic.003G080900.1
Synonym Sb03g006780
Functional annotation Ser/Thr protein kinase, putative, expressed
UniProt C5XQQ3
Pfam PF13947 PF14380 PF00069
Panther DB PTHR27009 PTHR27009:SF11
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G66910 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g04460.1 : Ser/Thr protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02582
Barley -
Wheat TraesCS3D02G048400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G117900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
2 Sobic.009G084300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphorylase domain containing protein, putative, expressed -
3 Sobic.003G229200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed K07424: cytochrome P450 family 3 subfamily A
4 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.009G161401 - -
6 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
7 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
9 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
10 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
11 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
12 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
13 Sobic.001G326400 cytochrome P450, putative, expressed -
14 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
15 Sobic.003G188100 TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
17 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.001G272900 avr9/Cf-9 rapidly elicited protein 74, putative, expressed -
19 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G080900 Sobic003G080900 Sobic002G117900 Sobic002G117900 Sobic003G080900--Sobic002G117900 Sobic009G084300 Sobic009G084300 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic007G120000 Sobic007G120000 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic002G155400 Sobic002G155400 Sobic003G080900--Sobic002G155400 Sobic003G273700 Sobic003G273700 Sobic003G080900--Sobic003G273700 Sobic004G106900 Sobic004G106900 Sobic003G080900--Sobic004G106900 Sobic007G196300 Sobic007G196300 Sobic003G080900--Sobic007G196300 Sobic003G440900 Sobic003G440900 Sobic002G117900--Sobic003G440900 Sobic002G117900--Sobic007G120000 Sobic002G117900--Sobic003G080900 Sobic005G024900 Sobic005G024900 Sobic002G117900--Sobic005G024900 Sobic002G117900--Sobic009G084300 Sobic007G021200 Sobic007G021200 Sobic002G117900--Sobic007G021200 Sobic002G117900--Sobic007G196300 Sobic003G106300 Sobic003G106300 Sobic002G117900--Sobic003G106300 Sobic002G117900--Sobic002G155400 Sobic009G084300--Sobic007G120000 Sobic001G218500 Sobic001G218500 Sobic009G084300--Sobic001G218500 Sobic010G001300 Sobic010G001300 Sobic009G084300--Sobic010G001300 Sobic001G302500 Sobic001G302500 Sobic009G084300--Sobic001G302500 Sobic003G020500 Sobic003G020500 Sobic009G084300--Sobic003G020500 Sobic006G230300 Sobic006G230300 Sobic009G084300--Sobic006G230300 Sobic010G128700 Sobic010G128700 Sobic009G084300--Sobic010G128700 Sobic001G216500 Sobic001G216500 Sobic009G084300--Sobic001G216500 Sobic001G299100 Sobic001G299100 Sobic009G084300--Sobic001G299100 Sobic003G229200--Sobic009G161401 Sobic003G229200--Sobic001G302500 Sobic006G096400 Sobic006G096400 Sobic003G229200--Sobic006G096400 Sobic002G024100 Sobic002G024100 Sobic003G229200--Sobic002G024100 Sobic003G229200--Sobic003G273700 Sobic003G229200--Sobic003G080900 Sobic004G347300 Sobic004G347300 Sobic003G229200--Sobic004G347300 Sobic007G078100 Sobic007G078100 Sobic003G229200--Sobic007G078100 Sobic005G152200 Sobic005G152200 Sobic003G229200--Sobic005G152200 Sobic007G120000--Sobic001G218500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic007G120000--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic007G120000--Sobic005G134600 Sobic009G161401--Sobic003G229200 Sobic009G161401--Sobic002G155400 Sobic009G161401--Sobic001G302500 Sobic009G172500 Sobic009G172500 Sobic009G161401--Sobic009G172500 Sobic009G161401--Sobic002G024100 Sobic004G311000 Sobic004G311000 Sobic009G161401--Sobic004G311000 Sobic009G161401--Sobic003G080900 Sobic009G161401--Sobic003G273700 Sobic004G074500 Sobic004G074500 Sobic009G161401--Sobic004G074500 Sobic001G386400 Sobic001G386400 Sobic002G155400--Sobic001G386400 Sobic002G155400--Sobic009G161401 Sobic006G119200 Sobic006G119200 Sobic002G155400--Sobic006G119200 Sobic008G044000 Sobic008G044000 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic001G512800 Sobic001G512800 Sobic002G155400--Sobic001G512800 Sobic004G341200 Sobic004G341200 Sobic002G155400--Sobic004G341200 Sobic002G155400--Sobic004G106900 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic004G106900--Sobic004G341200 Sobic009G210300 Sobic009G210300 Sobic004G106900--Sobic009G210300 Sobic004G106900--Sobic002G155400 Sobic004G106900--Sobic001G386400 Sobic004G106900--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic004G106900--Sobic009G167700 Sobic005G139400 Sobic005G139400 Sobic004G106900--Sobic005G139400 Sobic003G149200 Sobic003G149200 Sobic004G106900--Sobic003G149200 Sobic009G234800 Sobic009G234800 Sobic004G106900--Sobic009G234800 Sobic007G196300--Sobic002G283900 Sobic007G196300--Sobic005G024900 Sobic007G196300--Sobic003G440900 Sobic004G173600 Sobic004G173600 Sobic007G196300--Sobic004G173600 Sobic007G196300--Sobic003G080900 Sobic003G388300 Sobic003G388300 Sobic007G196300--Sobic003G388300 Sobic007G196300--Sobic007G120000 Sobic007G196300--Sobic003G106300 Sobic007G196300--Sobic005G152200
Octagon: transcription factors


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