Gene annotation
Transcriptome id Sobic.003G188100.3,Sobic.003G188100.2
Synonym Sb03g025290, CRK2
Functional annotation TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1B6Q480
Pfam PF07714 PF01657
Panther DB PTHR27002:SF15 PTHR27002
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT1G70520 : cysteine-rich RLK (RECEPTOR-like protein kinase) 2
RAP-DB (Rice) LOC_Os01g36790.1 : TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a038337
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
2 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
3 Sobic.004G008800 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
4 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
5 Sobic.003G204501 - -
6 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
7 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
8 Sobic.010G126900 lectin-like receptor kinase, putative, expressed -
9 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
10 Sobic.007G109900 bZIP transcription factor domain containing protein, expressed -
11 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
12 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
13 Sobic.006G182000 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
15 Sobic.005G075600 rp3 protein, putative, expressed -
16 Sobic.001G354400 O-methyltransferase, putative, expressed -
17 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
18 Sobic.010G212350 - -
19 Sobic.010G169100 bet v I allergen family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
20 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase


Gene co-expression network
sample Sobic003G188100 Sobic003G188100 Sobic002G013000 Sobic002G013000 Sobic003G188100--Sobic002G013000 Sobic002G088900 Sobic002G088900 Sobic003G188100--Sobic002G088900 Sobic004G008800 Sobic004G008800 Sobic003G188100--Sobic004G008800 Sobic002G089100 Sobic002G089100 Sobic003G188100--Sobic002G089100 Sobic003G204501 Sobic003G204501 Sobic003G188100--Sobic003G204501 Sobic003G080900 Sobic003G080900 Sobic003G188100--Sobic003G080900 Sobic006G246600 Sobic006G246600 Sobic003G188100--Sobic006G246600 Sobic010G126900 Sobic010G126900 Sobic003G188100--Sobic010G126900 Sobic004G106900 Sobic004G106900 Sobic003G188100--Sobic004G106900 Sobic002G013000--Sobic002G089100 Sobic002G013000--Sobic002G088900 Sobic002G013000--Sobic003G204501 Sobic002G013000--Sobic006G246600 Sobic002G013000--Sobic004G008800 Sobic002G013000--Sobic010G126900 Sobic002G013000--Sobic003G188100 Sobic001G316400 Sobic001G316400 Sobic002G013000--Sobic001G316400 Sobic002G013000--Sobic003G080900 Sobic002G088900--Sobic002G013000 Sobic002G088900--Sobic002G089100 Sobic002G088900--Sobic003G204501 Sobic002G088900--Sobic004G008800 Sobic002G088900--Sobic006G246600 Sobic002G088900--Sobic004G106900 Sobic005G043900 Sobic005G043900 Sobic002G088900--Sobic005G043900 Sobic003G149200 Sobic003G149200 Sobic002G088900--Sobic003G149200 Sobic002G085300 Sobic002G085300 Sobic002G088900--Sobic002G085300 Sobic004G008800--Sobic002G089100 Sobic004G008800--Sobic003G204501 Sobic004G008800--Sobic002G088900 Sobic004G008800--Sobic002G013000 Sobic003G111300 Sobic003G111300 Sobic004G008800--Sobic003G111300 Sobic007G109900 Sobic007G109900 Sobic004G008800--Sobic007G109900 Sobic004G008800--Sobic006G246600 Sobic004G008800--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic004G008800--Sobic002G122800 Sobic002G089100--Sobic002G013000 Sobic002G089100--Sobic004G008800 Sobic002G089100--Sobic002G088900 Sobic002G089100--Sobic006G246600 Sobic002G089100--Sobic003G204501 Sobic002G089100--Sobic005G043900 Sobic002G089100--Sobic001G316400 Sobic003G203200 Sobic003G203200 Sobic002G089100--Sobic003G203200 Sobic002G089100--Sobic003G188100 Sobic003G204501--Sobic004G008800 Sobic003G204501--Sobic002G013000 Sobic003G204501--Sobic002G088900 Sobic003G204501--Sobic002G089100 Sobic003G204501--Sobic006G246600 Sobic003G204501--Sobic007G109900 Sobic003G204501--Sobic001G316400 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000 Sobic002G117900 Sobic002G117900 Sobic003G080900--Sobic002G117900 Sobic009G084300 Sobic009G084300 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic007G120000 Sobic007G120000 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic002G155400 Sobic002G155400 Sobic003G080900--Sobic002G155400 Sobic003G273700 Sobic003G273700 Sobic003G080900--Sobic003G273700 Sobic003G080900--Sobic004G106900 Sobic007G196300 Sobic007G196300 Sobic003G080900--Sobic007G196300 Sobic006G246600--Sobic002G013000 Sobic006G246600--Sobic002G089100 Sobic006G246600--Sobic005G043900 Sobic006G246600--Sobic003G204501 Sobic006G246600--Sobic003G203200 Sobic006G246600--Sobic002G088900 Sobic006G246600--Sobic001G316400 Sobic001G354400 Sobic001G354400 Sobic006G246600--Sobic001G354400 Sobic008G048900 Sobic008G048900 Sobic006G246600--Sobic008G048900 Sobic005G075600 Sobic005G075600 Sobic010G126900--Sobic005G075600 Sobic004G008900 Sobic004G008900 Sobic010G126900--Sobic004G008900 Sobic010G126900--Sobic002G013000 Sobic001G326400 Sobic001G326400 Sobic010G126900--Sobic001G326400 Sobic003G204400 Sobic003G204400 Sobic010G126900--Sobic003G204400 Sobic010G126800 Sobic010G126800 Sobic010G126900--Sobic010G126800 Sobic003G020500 Sobic003G020500 Sobic010G126900--Sobic003G020500 Sobic001G218500 Sobic001G218500 Sobic010G126900--Sobic001G218500 Sobic002G193900 Sobic002G193900 Sobic010G126900--Sobic002G193900 Sobic004G341200 Sobic004G341200 Sobic004G106900--Sobic004G341200 Sobic009G210300 Sobic009G210300 Sobic004G106900--Sobic009G210300 Sobic004G106900--Sobic002G155400 Sobic001G386400 Sobic001G386400 Sobic004G106900--Sobic001G386400 Sobic006G119200 Sobic006G119200 Sobic004G106900--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic004G106900--Sobic009G167700 Sobic005G139400 Sobic005G139400 Sobic004G106900--Sobic005G139400 Sobic004G106900--Sobic003G149200 Sobic009G234800 Sobic009G234800 Sobic004G106900--Sobic009G234800
Octagon: transcription factors


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