Gene annotation
Transcriptome id Sobic.010G212350.1
Synonym -
Functional annotation -
UniProt A0A1W0VU30
Pfam -
Panther DB PTHR31315 PTHR31315:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78420 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g44275.1 : expressed protein
MaizeGDB (Corn) Zm00025a051635 , Zm00025a051631
Brachypodium -
Barley -
Wheat TraesCS7B02G409000 , TraesCS7D02G489000 , TraesCS7A02G501600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G221000 hypothetical protein -
2 Sobic.002G210800 hypothetical protein -
3 Sobic.004G058300 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
4 Sobic.006G082000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub41 - Putative Subtilisin homologue, expressed -
5 Sobic.009G120200 expressed protein -
6 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
7 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
8 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
9 Sobic.003G315500 adhesive/proline-rich protein, putative, expressed -
10 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
11 Sobic.007G034000 expressed protein -
12 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
13 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
14 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
15 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
16 Sobic.007G090457 - -
17 Sobic.003G188100 TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
19 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
20 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G212350 Sobic010G212350 Sobic005G221000 Sobic005G221000 Sobic010G212350--Sobic005G221000 Sobic002G210800 Sobic002G210800 Sobic010G212350--Sobic002G210800 Sobic004G058300 Sobic004G058300 Sobic010G212350--Sobic004G058300 Sobic006G082000 Sobic006G082000 Sobic010G212350--Sobic006G082000 Sobic009G120200 Sobic009G120200 Sobic010G212350--Sobic009G120200 Sobic004G106900 Sobic004G106900 Sobic010G212350--Sobic004G106900 Sobic008G074400 Sobic008G074400 Sobic010G212350--Sobic008G074400 Sobic001G069900 Sobic001G069900 Sobic010G212350--Sobic001G069900 Sobic003G315500 Sobic003G315500 Sobic010G212350--Sobic003G315500 Sobic005G221000--Sobic002G210800 Sobic005G221000--Sobic010G212350 Sobic007G034000 Sobic007G034000 Sobic005G221000--Sobic007G034000 Sobic005G221000--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic005G221000--Sobic006G181300 Sobic005G221000--Sobic003G315500 Sobic005G221000--Sobic009G120200 Sobic001G316400 Sobic001G316400 Sobic005G221000--Sobic001G316400 Sobic001G150650 Sobic001G150650 Sobic005G221000--Sobic001G150650 Sobic002G210800--Sobic005G221000 Sobic002G210800--Sobic007G034000 Sobic002G210800--Sobic010G212350 Sobic002G210800--Sobic003G315500 Sobic002G210800--Sobic001G069900 Sobic004G162400 Sobic004G162400 Sobic002G210800--Sobic004G162400 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic004G058300--Sobic010G212350 Sobic010G126900 Sobic010G126900 Sobic004G058300--Sobic010G126900 Sobic004G058300--Sobic004G106900 Sobic003G080900 Sobic003G080900 Sobic004G058300--Sobic003G080900 Sobic006G246600 Sobic006G246600 Sobic004G058300--Sobic006G246600 Sobic005G043900 Sobic005G043900 Sobic004G058300--Sobic005G043900 Sobic002G089100 Sobic002G089100 Sobic004G058300--Sobic002G089100 Sobic002G013000 Sobic002G013000 Sobic004G058300--Sobic002G013000 Sobic003G188100 Sobic003G188100 Sobic004G058300--Sobic003G188100 Sobic006G082000--Sobic007G034000 Sobic006G082000--Sobic010G212350 Sobic006G082000--Sobic006G181300 Sobic001G190300 Sobic001G190300 Sobic006G082000--Sobic001G190300 Sobic006G082000--Sobic005G221000 Sobic006G082000--Sobic001G316400 Sobic006G082000--Sobic002G210800 Sobic007G092700 Sobic007G092700 Sobic006G082000--Sobic007G092700 Sobic006G082000--Sobic008G074400 Sobic001G150600 Sobic001G150600 Sobic009G120200--Sobic001G150600 Sobic009G120200--Sobic005G221000 Sobic009G120200--Sobic003G315500 Sobic009G120200--Sobic001G150650 Sobic006G100332 Sobic006G100332 Sobic009G120200--Sobic006G100332 Sobic009G120200--Sobic010G212350 Sobic004G255000 Sobic004G255000 Sobic009G120200--Sobic004G255000 Sobic003G087200 Sobic003G087200 Sobic009G120200--Sobic003G087200 Sobic009G120200--Sobic002G210800 Sobic004G341200 Sobic004G341200 Sobic004G106900--Sobic004G341200 Sobic009G210300 Sobic009G210300 Sobic004G106900--Sobic009G210300 Sobic002G155400 Sobic002G155400 Sobic004G106900--Sobic002G155400 Sobic001G386400 Sobic001G386400 Sobic004G106900--Sobic001G386400 Sobic006G119200 Sobic006G119200 Sobic004G106900--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic004G106900--Sobic009G167700 Sobic005G139400 Sobic005G139400 Sobic004G106900--Sobic005G139400 Sobic003G149200 Sobic003G149200 Sobic004G106900--Sobic003G149200 Sobic009G234800 Sobic009G234800 Sobic004G106900--Sobic009G234800 Sobic008G074400--Sobic001G316400 Sobic004G225100 Sobic004G225100 Sobic008G074400--Sobic004G225100 Sobic008G074400--Sobic001G069900 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic002G087800 Sobic002G087800 Sobic008G074400--Sobic002G087800 Sobic001G359500 Sobic001G359500 Sobic008G074400--Sobic001G359500 Sobic006G091700 Sobic006G091700 Sobic008G074400--Sobic006G091700 Sobic001G504900 Sobic001G504900 Sobic008G074400--Sobic001G504900 Sobic001G015500 Sobic001G015500 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic001G069900--Sobic003G087200 Sobic001G069900--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic001G069900--Sobic009G114000 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G325200 Sobic001G325200 Sobic001G069900--Sobic001G325200 Sobic003G315500--Sobic002G210800 Sobic003G315500--Sobic005G221000 Sobic003G315500--Sobic001G150650 Sobic003G315500--Sobic009G120200 Sobic003G315500--Sobic003G087200 Sobic003G315500--Sobic001G150600 Sobic002G265700 Sobic002G265700 Sobic003G315500--Sobic002G265700 Sobic003G315500--Sobic006G100332 Sobic003G315500--Sobic010G212350
Octagon: transcription factors


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