Gene annotation
Transcriptome id Sobic.003G315500.1
Synonym Sb03g036290
Functional annotation adhesive/proline-rich protein, putative, expressed
UniProt C5XLN3
Pfam PF12734
Panther DB PTHR31568 PTHR31568:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g57004.1 : adhesive/proline-rich protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK10044 , KQK10045
Barley HORVU3Hr1G076400.4 , HORVU3Hr1G076400.5 , HORVU3Hr1G076400.6 , HORVU3Hr1G076400.1 , HORVU3Hr1G076400.3
Wheat TraesCS3A02G318900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G210800 hypothetical protein -
2 Sobic.005G221000 hypothetical protein -
3 Sobic.001G150650 - -
4 Sobic.009G120200 expressed protein -
5 Sobic.003G087200 nuclease PA3, putative, expressed -
6 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
7 Sobic.002G265700 zinc knuckle family protein, expressed -
8 Sobic.006G100332 - -
9 Sobic.010G212350 - -
10 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
11 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
13 Sobic.007G034000 expressed protein -
14 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
15 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
16 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
17 Sobic.010G248900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
18 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
19 Sobic.003G105800 No apical meristem protein, putative, expressed -
20 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -


Gene co-expression network
sample Sobic003G315500 Sobic003G315500 Sobic002G210800 Sobic002G210800 Sobic003G315500--Sobic002G210800 Sobic005G221000 Sobic005G221000 Sobic003G315500--Sobic005G221000 Sobic001G150650 Sobic001G150650 Sobic003G315500--Sobic001G150650 Sobic009G120200 Sobic009G120200 Sobic003G315500--Sobic009G120200 Sobic003G087200 Sobic003G087200 Sobic003G315500--Sobic003G087200 Sobic001G150600 Sobic001G150600 Sobic003G315500--Sobic001G150600 Sobic002G265700 Sobic002G265700 Sobic003G315500--Sobic002G265700 Sobic006G100332 Sobic006G100332 Sobic003G315500--Sobic006G100332 Sobic010G212350 Sobic010G212350 Sobic003G315500--Sobic010G212350 Sobic002G210800--Sobic005G221000 Sobic007G034000 Sobic007G034000 Sobic002G210800--Sobic007G034000 Sobic002G210800--Sobic010G212350 Sobic002G210800--Sobic003G315500 Sobic001G069900 Sobic001G069900 Sobic002G210800--Sobic001G069900 Sobic004G162400 Sobic004G162400 Sobic002G210800--Sobic004G162400 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic005G221000--Sobic002G210800 Sobic005G221000--Sobic010G212350 Sobic005G221000--Sobic007G034000 Sobic005G221000--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic005G221000--Sobic006G181300 Sobic005G221000--Sobic003G315500 Sobic005G221000--Sobic009G120200 Sobic001G316400 Sobic001G316400 Sobic005G221000--Sobic001G316400 Sobic005G221000--Sobic001G150650 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic001G150650--Sobic003G087200 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200 Sobic009G120200--Sobic001G150600 Sobic009G120200--Sobic005G221000 Sobic009G120200--Sobic003G315500 Sobic009G120200--Sobic001G150650 Sobic009G120200--Sobic006G100332 Sobic009G120200--Sobic010G212350 Sobic009G120200--Sobic004G255000 Sobic009G120200--Sobic003G087200 Sobic009G120200--Sobic002G210800 Sobic003G087200--Sobic001G150600 Sobic003G087200--Sobic006G100332 Sobic004G321800 Sobic004G321800 Sobic003G087200--Sobic004G321800 Sobic006G030700 Sobic006G030700 Sobic003G087200--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic003G087200--Sobic009G226300 Sobic006G091700 Sobic006G091700 Sobic003G087200--Sobic006G091700 Sobic003G148800 Sobic003G148800 Sobic003G087200--Sobic003G148800 Sobic003G087200--Sobic008G153400 Sobic009G114000 Sobic009G114000 Sobic003G087200--Sobic009G114000 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic001G150600--Sobic006G030700 Sobic001G150600--Sobic009G226300 Sobic001G150600--Sobic003G148800 Sobic001G325200 Sobic001G325200 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic001G150600--Sobic004G321800 Sobic002G265700--Sobic001G150650 Sobic002G265700--Sobic001G150600 Sobic007G093000 Sobic007G093000 Sobic002G265700--Sobic007G093000 Sobic007G092900 Sobic007G092900 Sobic002G265700--Sobic007G092900 Sobic002G265700--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic002G265700--Sobic002G420700 Sobic007G035000 Sobic007G035000 Sobic002G265700--Sobic007G035000 Sobic002G265700--Sobic001G162700 Sobic002G265700--Sobic003G315500 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic007G187300 Sobic007G187300 Sobic006G100332--Sobic007G187300 Sobic006G100332--Sobic006G030700 Sobic001G249300 Sobic001G249300 Sobic006G100332--Sobic001G249300 Sobic006G100332--Sobic003G148800 Sobic010G212350--Sobic005G221000 Sobic010G212350--Sobic002G210800 Sobic004G058300 Sobic004G058300 Sobic010G212350--Sobic004G058300 Sobic006G082000 Sobic006G082000 Sobic010G212350--Sobic006G082000 Sobic010G212350--Sobic009G120200 Sobic004G106900 Sobic004G106900 Sobic010G212350--Sobic004G106900 Sobic008G074400 Sobic008G074400 Sobic010G212350--Sobic008G074400 Sobic010G212350--Sobic001G069900 Sobic010G212350--Sobic003G315500
Octagon: transcription factors


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