Gene annotation
Transcriptome id Sobic.001G150650.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5P4
Pfam -
Panther DB PTHR31499 PTHR31499:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13640 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g45194.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
2 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
3 Sobic.003G087200 nuclease PA3, putative, expressed -
4 Sobic.006G100332 - -
5 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
6 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
7 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
8 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
9 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
10 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
11 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
12 Sobic.006G030700 receptor kinase, putative, expressed -
13 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
14 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
16 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
17 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
18 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
19 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase


Gene co-expression network
sample Sobic001G150650 Sobic001G150650 Sobic001G150600 Sobic001G150600 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic003G087200 Sobic003G087200 Sobic001G150650--Sobic003G087200 Sobic006G100332 Sobic006G100332 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic006G030700 Sobic006G030700 Sobic001G150600--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic001G150600--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic001G150600--Sobic003G148800 Sobic001G325200 Sobic001G325200 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic004G321800 Sobic004G321800 Sobic001G150600--Sobic004G321800 Sobic004G255000--Sobic009G029600 Sobic005G018500 Sobic005G018500 Sobic004G255000--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic004G255000--Sobic001G249300 Sobic004G255000--Sobic009G054500 Sobic001G280200 Sobic001G280200 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G260000 Sobic004G260000 Sobic004G255000--Sobic004G260000 Sobic003G219600 Sobic003G219600 Sobic004G255000--Sobic003G219600 Sobic005G152100 Sobic005G152100 Sobic004G255000--Sobic005G152100 Sobic003G087200--Sobic001G150600 Sobic003G087200--Sobic006G100332 Sobic003G087200--Sobic004G321800 Sobic003G087200--Sobic006G030700 Sobic003G087200--Sobic009G226300 Sobic006G091700 Sobic006G091700 Sobic003G087200--Sobic006G091700 Sobic003G087200--Sobic003G148800 Sobic003G087200--Sobic008G153400 Sobic009G114000 Sobic009G114000 Sobic003G087200--Sobic009G114000 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic007G187300 Sobic007G187300 Sobic006G100332--Sobic007G187300 Sobic006G100332--Sobic006G030700 Sobic006G100332--Sobic001G249300 Sobic006G100332--Sobic003G148800 Sobic009G029600--Sobic004G255000 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic009G029600--Sobic009G211400 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic008G153400--Sobic001G150600 Sobic006G199000 Sobic006G199000 Sobic008G153400--Sobic006G199000 Sobic008G153400--Sobic006G030700 Sobic008G153400--Sobic001G325200 Sobic003G398100 Sobic003G398100 Sobic008G153400--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic008G153400--Sobic003G257100 Sobic008G153400--Sobic003G087200 Sobic008G153400--Sobic006G091700 Sobic008G153400--Sobic009G226300 Sobic002G085300--Sobic006G091700 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic002G085300--Sobic003G087200 Sobic001G015500 Sobic001G015500 Sobic002G085300--Sobic001G015500 Sobic002G085300--Sobic001G150600 Sobic002G085300--Sobic008G153400 Sobic001G069900 Sobic001G069900 Sobic002G085300--Sobic001G069900 Sobic002G085300--Sobic001G150650 Sobic001G162700--Sobic001G280200 Sobic001G162700--Sobic001G249300 Sobic010G098100 Sobic010G098100 Sobic001G162700--Sobic010G098100 Sobic001G162700--Sobic009G029600 Sobic001G162700--Sobic003G259200 Sobic001G162700--Sobic004G255000 Sobic001G483500 Sobic001G483500 Sobic001G162700--Sobic001G483500 Sobic001G162700--Sobic006G030700 Sobic001G412700 Sobic001G412700 Sobic001G162700--Sobic001G412700 Sobic003G259200--Sobic009G054500 Sobic003G259200--Sobic005G018500 Sobic003G259200--Sobic001G249300 Sobic003G259200--Sobic003G219600 Sobic003G259200--Sobic004G255000 Sobic003G259200--Sobic009G226300 Sobic003G259200--Sobic009G029600 Sobic005G151700 Sobic005G151700 Sobic003G259200--Sobic005G151700 Sobic003G259200--Sobic007G187300
Octagon: transcription factors


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