Gene annotation
Transcriptome id Sobic.005G221000.1
Synonym
Functional annotation hypothetical protein
UniProt A0A1B6PU35
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) ChrUn.fgenesh.mRNA.35 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G210800 hypothetical protein -
2 Sobic.010G212350 - -
3 Sobic.007G034000 expressed protein -
4 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
5 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
6 Sobic.003G315500 adhesive/proline-rich protein, putative, expressed -
7 Sobic.009G120200 expressed protein -
8 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
9 Sobic.001G150650 - -
10 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
11 Sobic.003G087200 nuclease PA3, putative, expressed -
12 Sobic.006G082000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub41 - Putative Subtilisin homologue, expressed -
13 Sobic.008G048800 citrate-binding protein precursor, putative, expressed -
14 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
16 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
17 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
18 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.002G130000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
20 Sobic.001G359500 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic005G221000 Sobic005G221000 Sobic002G210800 Sobic002G210800 Sobic005G221000--Sobic002G210800 Sobic010G212350 Sobic010G212350 Sobic005G221000--Sobic010G212350 Sobic007G034000 Sobic007G034000 Sobic005G221000--Sobic007G034000 Sobic001G069900 Sobic001G069900 Sobic005G221000--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic005G221000--Sobic006G181300 Sobic003G315500 Sobic003G315500 Sobic005G221000--Sobic003G315500 Sobic009G120200 Sobic009G120200 Sobic005G221000--Sobic009G120200 Sobic001G316400 Sobic001G316400 Sobic005G221000--Sobic001G316400 Sobic001G150650 Sobic001G150650 Sobic005G221000--Sobic001G150650 Sobic002G210800--Sobic005G221000 Sobic002G210800--Sobic007G034000 Sobic002G210800--Sobic010G212350 Sobic002G210800--Sobic003G315500 Sobic002G210800--Sobic001G069900 Sobic004G162400 Sobic004G162400 Sobic002G210800--Sobic004G162400 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic010G212350--Sobic005G221000 Sobic010G212350--Sobic002G210800 Sobic004G058300 Sobic004G058300 Sobic010G212350--Sobic004G058300 Sobic006G082000 Sobic006G082000 Sobic010G212350--Sobic006G082000 Sobic010G212350--Sobic009G120200 Sobic004G106900 Sobic004G106900 Sobic010G212350--Sobic004G106900 Sobic008G074400 Sobic008G074400 Sobic010G212350--Sobic008G074400 Sobic010G212350--Sobic001G069900 Sobic010G212350--Sobic003G315500 Sobic007G092700 Sobic007G092700 Sobic007G034000--Sobic007G092700 Sobic007G034000--Sobic006G181300 Sobic007G034000--Sobic002G210800 Sobic001G359500 Sobic001G359500 Sobic007G034000--Sobic001G359500 Sobic007G034000--Sobic001G069900 Sobic007G034000--Sobic006G082000 Sobic007G034000--Sobic005G221000 Sobic001G015500 Sobic001G015500 Sobic007G034000--Sobic001G015500 Sobic001G504900 Sobic001G504900 Sobic007G034000--Sobic001G504900 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic003G087200 Sobic003G087200 Sobic001G069900--Sobic003G087200 Sobic006G091700 Sobic006G091700 Sobic001G069900--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic001G069900--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic001G069900--Sobic009G034700 Sobic001G325200 Sobic001G325200 Sobic001G069900--Sobic001G325200 Sobic006G181300--Sobic001G069900 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic006G181300--Sobic001G150600 Sobic003G315500--Sobic002G210800 Sobic003G315500--Sobic005G221000 Sobic003G315500--Sobic001G150650 Sobic003G315500--Sobic009G120200 Sobic003G315500--Sobic003G087200 Sobic003G315500--Sobic001G150600 Sobic002G265700 Sobic002G265700 Sobic003G315500--Sobic002G265700 Sobic006G100332 Sobic006G100332 Sobic003G315500--Sobic006G100332 Sobic003G315500--Sobic010G212350 Sobic009G120200--Sobic001G150600 Sobic009G120200--Sobic005G221000 Sobic009G120200--Sobic003G315500 Sobic009G120200--Sobic001G150650 Sobic009G120200--Sobic006G100332 Sobic009G120200--Sobic010G212350 Sobic004G255000 Sobic004G255000 Sobic009G120200--Sobic004G255000 Sobic009G120200--Sobic003G087200 Sobic009G120200--Sobic002G210800 Sobic003G203200 Sobic003G203200 Sobic001G316400--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic001G316400--Sobic002G122800 Sobic001G316400--Sobic008G074400 Sobic001G316400--Sobic006G181300 Sobic001G316400--Sobic001G504900 Sobic002G085300 Sobic002G085300 Sobic001G316400--Sobic002G085300 Sobic001G316400--Sobic009G114000 Sobic001G316400--Sobic006G091700 Sobic001G354400 Sobic001G354400 Sobic001G316400--Sobic001G354400 Sobic001G150650--Sobic001G150600 Sobic001G150650--Sobic004G255000 Sobic001G150650--Sobic003G087200 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200
Octagon: transcription factors


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