Gene annotation
Transcriptome id Sobic.002G265700.2
Synonym
Functional annotation zinc knuckle family protein, expressed
UniProt A0A1W0W5X2
Pfam -
Panther DB PTHR33075 PTHR33075:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g28300.1 : zinc knuckle family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G150650 - -
2 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
3 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G087200 nuclease PA3, putative, expressed -
6 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
7 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
8 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
9 Sobic.003G315500 adhesive/proline-rich protein, putative, expressed -
10 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
11 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
12 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
13 Sobic.006G100332 - -
14 Sobic.010G182500 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
15 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
16 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
18 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
19 Sobic.006G030700 receptor kinase, putative, expressed -
20 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic002G265700 Sobic002G265700 Sobic001G150650 Sobic001G150650 Sobic002G265700--Sobic001G150650 Sobic001G150600 Sobic001G150600 Sobic002G265700--Sobic001G150600 Sobic007G093000 Sobic007G093000 Sobic002G265700--Sobic007G093000 Sobic007G092900 Sobic007G092900 Sobic002G265700--Sobic007G092900 Sobic003G087200 Sobic003G087200 Sobic002G265700--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic002G265700--Sobic002G420700 Sobic007G035000 Sobic007G035000 Sobic002G265700--Sobic007G035000 Sobic001G162700 Sobic001G162700 Sobic002G265700--Sobic001G162700 Sobic003G315500 Sobic003G315500 Sobic002G265700--Sobic003G315500 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic001G150650--Sobic003G087200 Sobic006G100332 Sobic006G100332 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic001G150650--Sobic002G085300 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200 Sobic001G150600--Sobic003G087200 Sobic001G150600--Sobic006G100332 Sobic001G150600--Sobic008G153400 Sobic006G030700 Sobic006G030700 Sobic001G150600--Sobic006G030700 Sobic009G226300 Sobic009G226300 Sobic001G150600--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic001G150600--Sobic003G148800 Sobic001G325200 Sobic001G325200 Sobic001G150600--Sobic001G325200 Sobic009G054500 Sobic009G054500 Sobic001G150600--Sobic009G054500 Sobic004G321800 Sobic004G321800 Sobic001G150600--Sobic004G321800 Sobic007G093000--Sobic007G092900 Sobic001G249300 Sobic001G249300 Sobic007G093000--Sobic001G249300 Sobic007G093000--Sobic006G030700 Sobic007G093000--Sobic009G226300 Sobic007G187300 Sobic007G187300 Sobic007G093000--Sobic007G187300 Sobic007G093000--Sobic009G054500 Sobic007G093000--Sobic003G259200 Sobic007G093000--Sobic001G150600 Sobic004G320600 Sobic004G320600 Sobic007G093000--Sobic004G320600 Sobic007G092900--Sobic007G093000 Sobic007G092900--Sobic009G226300 Sobic007G092900--Sobic001G249300 Sobic007G092900--Sobic006G030700 Sobic007G092900--Sobic009G054500 Sobic007G092900--Sobic007G187300 Sobic007G092900--Sobic001G150600 Sobic007G092900--Sobic004G320600 Sobic007G092900--Sobic006G100332 Sobic003G087200--Sobic001G150600 Sobic003G087200--Sobic006G100332 Sobic003G087200--Sobic004G321800 Sobic003G087200--Sobic006G030700 Sobic003G087200--Sobic009G226300 Sobic006G091700 Sobic006G091700 Sobic003G087200--Sobic006G091700 Sobic003G087200--Sobic003G148800 Sobic003G087200--Sobic008G153400 Sobic009G114000 Sobic009G114000 Sobic003G087200--Sobic009G114000 Sobic005G178100 Sobic005G178100 Sobic002G420700--Sobic005G178100 Sobic002G420700--Sobic007G035000 Sobic002G420700--Sobic008G153400 Sobic002G420700--Sobic003G087200 Sobic002G420700--Sobic009G114000 Sobic002G420700--Sobic001G150600 Sobic002G420700--Sobic006G091700 Sobic006G226400 Sobic006G226400 Sobic002G420700--Sobic006G226400 Sobic001G015500 Sobic001G015500 Sobic002G420700--Sobic001G015500 Sobic007G035000--Sobic002G420700 Sobic005G216000 Sobic005G216000 Sobic007G035000--Sobic005G216000 Sobic007G035000--Sobic005G178100 Sobic003G105800 Sobic003G105800 Sobic007G035000--Sobic003G105800 Sobic007G035000--Sobic003G087200 Sobic004G071200 Sobic004G071200 Sobic007G035000--Sobic004G071200 Sobic003G244600 Sobic003G244600 Sobic007G035000--Sobic003G244600 Sobic007G035000--Sobic009G114000 Sobic009G034700 Sobic009G034700 Sobic007G035000--Sobic009G034700 Sobic001G280200 Sobic001G280200 Sobic001G162700--Sobic001G280200 Sobic001G162700--Sobic001G249300 Sobic010G098100 Sobic010G098100 Sobic001G162700--Sobic010G098100 Sobic001G162700--Sobic009G029600 Sobic001G162700--Sobic003G259200 Sobic001G162700--Sobic004G255000 Sobic001G483500 Sobic001G483500 Sobic001G162700--Sobic001G483500 Sobic001G162700--Sobic006G030700 Sobic001G412700 Sobic001G412700 Sobic001G162700--Sobic001G412700 Sobic002G210800 Sobic002G210800 Sobic003G315500--Sobic002G210800 Sobic005G221000 Sobic005G221000 Sobic003G315500--Sobic005G221000 Sobic003G315500--Sobic001G150650 Sobic009G120200 Sobic009G120200 Sobic003G315500--Sobic009G120200 Sobic003G315500--Sobic003G087200 Sobic003G315500--Sobic001G150600 Sobic003G315500--Sobic002G265700 Sobic003G315500--Sobic006G100332 Sobic010G212350 Sobic010G212350 Sobic003G315500--Sobic010G212350
Octagon: transcription factors


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