Gene annotation
Transcriptome id Sobic.002G088900.1
Synonym Sb02g007350
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5X202
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os07g02880.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009479 , Zm00025a044910
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
2 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
3 Sobic.003G204501 - -
4 Sobic.004G008800 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
6 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
7 Sobic.005G043900 protein kinase domain containing protein, expressed -
8 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
9 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.003G188100 TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
13 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
14 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
15 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
16 Sobic.006G244400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
17 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
18 Sobic.005G152200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
19 Sobic.005G215200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@plant viral response family protein, putative, expressed -
20 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic002G088900 Sobic002G088900 Sobic002G013000 Sobic002G013000 Sobic002G088900--Sobic002G013000 Sobic002G089100 Sobic002G089100 Sobic002G088900--Sobic002G089100 Sobic003G204501 Sobic003G204501 Sobic002G088900--Sobic003G204501 Sobic004G008800 Sobic004G008800 Sobic002G088900--Sobic004G008800 Sobic006G246600 Sobic006G246600 Sobic002G088900--Sobic006G246600 Sobic004G106900 Sobic004G106900 Sobic002G088900--Sobic004G106900 Sobic005G043900 Sobic005G043900 Sobic002G088900--Sobic005G043900 Sobic003G149200 Sobic003G149200 Sobic002G088900--Sobic003G149200 Sobic002G085300 Sobic002G085300 Sobic002G088900--Sobic002G085300 Sobic002G013000--Sobic002G089100 Sobic002G013000--Sobic002G088900 Sobic002G013000--Sobic003G204501 Sobic002G013000--Sobic006G246600 Sobic002G013000--Sobic004G008800 Sobic010G126900 Sobic010G126900 Sobic002G013000--Sobic010G126900 Sobic003G188100 Sobic003G188100 Sobic002G013000--Sobic003G188100 Sobic001G316400 Sobic001G316400 Sobic002G013000--Sobic001G316400 Sobic003G080900 Sobic003G080900 Sobic002G013000--Sobic003G080900 Sobic002G089100--Sobic002G013000 Sobic002G089100--Sobic004G008800 Sobic002G089100--Sobic002G088900 Sobic002G089100--Sobic006G246600 Sobic002G089100--Sobic003G204501 Sobic002G089100--Sobic005G043900 Sobic002G089100--Sobic001G316400 Sobic003G203200 Sobic003G203200 Sobic002G089100--Sobic003G203200 Sobic002G089100--Sobic003G188100 Sobic003G204501--Sobic004G008800 Sobic003G204501--Sobic002G013000 Sobic003G204501--Sobic002G088900 Sobic003G204501--Sobic002G089100 Sobic003G204501--Sobic006G246600 Sobic007G109900 Sobic007G109900 Sobic003G204501--Sobic007G109900 Sobic003G204501--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000 Sobic004G008800--Sobic002G089100 Sobic004G008800--Sobic003G204501 Sobic004G008800--Sobic002G088900 Sobic004G008800--Sobic002G013000 Sobic003G111300 Sobic003G111300 Sobic004G008800--Sobic003G111300 Sobic004G008800--Sobic007G109900 Sobic004G008800--Sobic006G246600 Sobic004G008800--Sobic001G316400 Sobic004G008800--Sobic002G122800 Sobic006G246600--Sobic002G013000 Sobic006G246600--Sobic002G089100 Sobic006G246600--Sobic005G043900 Sobic006G246600--Sobic003G204501 Sobic006G246600--Sobic003G203200 Sobic006G246600--Sobic002G088900 Sobic006G246600--Sobic001G316400 Sobic001G354400 Sobic001G354400 Sobic006G246600--Sobic001G354400 Sobic008G048900 Sobic008G048900 Sobic006G246600--Sobic008G048900 Sobic004G341200 Sobic004G341200 Sobic004G106900--Sobic004G341200 Sobic009G210300 Sobic009G210300 Sobic004G106900--Sobic009G210300 Sobic002G155400 Sobic002G155400 Sobic004G106900--Sobic002G155400 Sobic001G386400 Sobic001G386400 Sobic004G106900--Sobic001G386400 Sobic006G119200 Sobic006G119200 Sobic004G106900--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic004G106900--Sobic009G167700 Sobic005G139400 Sobic005G139400 Sobic004G106900--Sobic005G139400 Sobic004G106900--Sobic003G149200 Sobic009G234800 Sobic009G234800 Sobic004G106900--Sobic009G234800 Sobic005G043900--Sobic003G203200 Sobic005G043900--Sobic006G246600 Sobic005G043600 Sobic005G043600 Sobic005G043900--Sobic005G043600 Sobic005G043900--Sobic008G048900 Sobic005G043900--Sobic002G089100 Sobic005G043900--Sobic002G088900 Sobic006G091700 Sobic006G091700 Sobic005G043900--Sobic006G091700 Sobic008G074400 Sobic008G074400 Sobic005G043900--Sobic008G074400 Sobic005G043900--Sobic001G316400 Sobic001G322700 Sobic001G322700 Sobic003G149200--Sobic001G322700 Sobic003G149200--Sobic006G091700 Sobic005G215900 Sobic005G215900 Sobic003G149200--Sobic005G215900 Sobic006G030700 Sobic006G030700 Sobic003G149200--Sobic006G030700 Sobic009G161000 Sobic009G161000 Sobic003G149200--Sobic009G161000 Sobic005G216000 Sobic005G216000 Sobic003G149200--Sobic005G216000 Sobic001G249300 Sobic001G249300 Sobic003G149200--Sobic001G249300 Sobic003G087200 Sobic003G087200 Sobic003G149200--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic003G149200--Sobic004G101900 Sobic002G085300--Sobic006G091700 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic002G085300--Sobic003G087200 Sobic001G015500 Sobic001G015500 Sobic002G085300--Sobic001G015500 Sobic001G150600 Sobic001G150600 Sobic002G085300--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic002G085300--Sobic008G153400 Sobic001G069900 Sobic001G069900 Sobic002G085300--Sobic001G069900 Sobic001G150650 Sobic001G150650 Sobic002G085300--Sobic001G150650
Octagon: transcription factors


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