Gene annotation
Transcriptome id Sobic.001G386400.2,Sobic.001G386400.4,Sobic.001G386400.3
Synonym ALA1
Functional annotation phospholipid-transporting ATPase, putative, expressed
UniProt A0A1Z5S9U3 , A0A1Z5S9S3 , A0A1Z5SA16
Pfam PF00122 PF12710 PF16209 PF16212 PF12710 PF16212
Panther DB PTHR24092 PTHR24092:SF74
NCBI CDD -
KEGG Orthology K14802; DRS2, phospholipid-transporting ATPase
Gene Ontology GO:0016021; integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding GO:0000166nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G04930 : aminophospholipid ATPase 1
RAP-DB (Rice) LOC_Os03g20949.1 : phospholipid-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a002276 , Zm00025a002277
Brachypodium PNT77491 , KQK21871 , KQK21873 , KQK21872
Barley HORVU4Hr1G051450.9 , HORVU4Hr1G051450.8 , HORVU4Hr1G051450.2 , HORVU4Hr1G051450.7 , HORVU4Hr1G051450.6 , HORVU4Hr1G051450.4 , HORVU4Hr1G051450.22 , HORVU4Hr1G051450.23 , HORVU4Hr1G051450.20 , HORVU4Hr1G051450.21 , HORVU4Hr1G051450.19 , HORVU4Hr1G051450.18 , HORVU4Hr1G051450.13 , HORVU4Hr1G051450.12 , HORVU4Hr1G051450.11 , HORVU4Hr1G051450.10 , HORVU4Hr1G051450.17 , HORVU4Hr1G051450.16 , HORVU4Hr1G051450.15 , HORVU4Hr1G051450.14 , HORVU4Hr1G051450.3 , HORVU4Hr1G051450.5
Wheat TraesCS4B02G174300 , TraesCS4B02G174300 , TraesCS4A02G130300 , TraesCS4A02G130300 , TraesCS4A02G130300 , TraesCS4A02G130300 , TraesCS4A02G130300 , TraesCS4D02G176300 , TraesCS4D02G176300 , TraesCS4B02G174200 , TraesCS4D02G176200 , TraesCS4D02G176200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
2 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
3 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
4 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
5 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
6 Sobic.010G161450 - -
7 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
8 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
9 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
10 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
11 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
12 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
13 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
14 Sobic.006G002600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
15 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
16 Sobic.010G220600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
17 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
18 Sobic.009G004200 MAC/Perforin domain containing protein, putative, expressed -
19 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
20 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic001G386400 Sobic001G386400 Sobic006G119200 Sobic006G119200 Sobic001G386400--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic001G386400--Sobic009G167700 Sobic009G000200 Sobic009G000200 Sobic001G386400--Sobic009G000200 Sobic003G316300 Sobic003G316300 Sobic001G386400--Sobic003G316300 Sobic002G155400 Sobic002G155400 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic004G341200 Sobic004G341200 Sobic001G386400--Sobic004G341200 Sobic006G119200--Sobic001G386400 Sobic001G132000 Sobic001G132000 Sobic006G119200--Sobic001G132000 Sobic010G016400 Sobic010G016400 Sobic006G119200--Sobic010G016400 Sobic006G119200--Sobic009G167700 Sobic006G119200--Sobic002G155400 Sobic009G234800 Sobic009G234800 Sobic006G119200--Sobic009G234800 Sobic001G512800 Sobic001G512800 Sobic006G119200--Sobic001G512800 Sobic005G231900 Sobic005G231900 Sobic006G119200--Sobic005G231900 Sobic004G347300 Sobic004G347300 Sobic006G119200--Sobic004G347300 Sobic002G244100 Sobic002G244100 Sobic009G167700--Sobic002G244100 Sobic009G167700--Sobic004G341200 Sobic004G102400 Sobic004G102400 Sobic009G167700--Sobic004G102400 Sobic009G167700--Sobic001G386400 Sobic009G167700--Sobic010G016400 Sobic001G089800 Sobic001G089800 Sobic009G167700--Sobic001G089800 Sobic003G354400 Sobic003G354400 Sobic009G167700--Sobic003G354400 Sobic009G167700--Sobic001G132000 Sobic009G167700--Sobic006G119200 Sobic009G079300 Sobic009G079300 Sobic009G000200--Sobic009G079300 Sobic009G000200--Sobic003G316300 Sobic009G000200--Sobic001G386400 Sobic001G298500 Sobic001G298500 Sobic009G000200--Sobic001G298500 Sobic006G002600 Sobic006G002600 Sobic009G000200--Sobic006G002600 Sobic008G189200 Sobic008G189200 Sobic009G000200--Sobic008G189200 Sobic004G125900 Sobic004G125900 Sobic009G000200--Sobic004G125900 Sobic001G180900 Sobic001G180900 Sobic009G000200--Sobic001G180900 Sobic006G149600 Sobic006G149600 Sobic009G000200--Sobic006G149600 Sobic003G316300--Sobic009G000200 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic003G316300--Sobic006G119200 Sobic003G316300--Sobic009G167700 Sobic001G273500 Sobic001G273500 Sobic003G316300--Sobic001G273500 Sobic003G316300--Sobic004G125900 Sobic003G316300--Sobic001G298500 Sobic009G200300 Sobic009G200300 Sobic003G316300--Sobic009G200300 Sobic002G155400--Sobic001G386400 Sobic009G161401 Sobic009G161401 Sobic002G155400--Sobic009G161401 Sobic002G155400--Sobic006G119200 Sobic008G044000 Sobic008G044000 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic002G155400--Sobic001G512800 Sobic002G155400--Sobic004G341200 Sobic002G155400--Sobic004G106900 Sobic010G220600 Sobic010G220600 Sobic010G161450--Sobic010G220600 Sobic001G049200 Sobic001G049200 Sobic010G161450--Sobic001G049200 Sobic010G161450--Sobic001G386400 Sobic006G064800 Sobic006G064800 Sobic010G161450--Sobic006G064800 Sobic003G273700 Sobic003G273700 Sobic010G161450--Sobic003G273700 Sobic002G242500 Sobic002G242500 Sobic010G161450--Sobic002G242500 Sobic007G136100 Sobic007G136100 Sobic010G161450--Sobic007G136100 Sobic003G167500 Sobic003G167500 Sobic010G161450--Sobic003G167500 Sobic007G221100 Sobic007G221100 Sobic010G161450--Sobic007G221100 Sobic004G106900--Sobic004G341200 Sobic009G210300 Sobic009G210300 Sobic004G106900--Sobic009G210300 Sobic004G106900--Sobic002G155400 Sobic004G106900--Sobic001G386400 Sobic004G106900--Sobic006G119200 Sobic004G106900--Sobic009G167700 Sobic005G139400 Sobic005G139400 Sobic004G106900--Sobic005G139400 Sobic003G149200 Sobic003G149200 Sobic004G106900--Sobic003G149200 Sobic004G106900--Sobic009G234800 Sobic005G152200 Sobic005G152200 Sobic002G024100--Sobic005G152200 Sobic002G024100--Sobic001G386400 Sobic003G280900 Sobic003G280900 Sobic002G024100--Sobic003G280900 Sobic006G096400 Sobic006G096400 Sobic002G024100--Sobic006G096400 Sobic002G024100--Sobic002G242500 Sobic003G229200 Sobic003G229200 Sobic002G024100--Sobic003G229200 Sobic002G024100--Sobic010G016400 Sobic002G024100--Sobic009G167700 Sobic009G172500 Sobic009G172500 Sobic002G024100--Sobic009G172500 Sobic004G341200--Sobic001G089800 Sobic004G341200--Sobic002G322900 Sobic004G341200--Sobic009G167700 Sobic004G341200--Sobic001G512800 Sobic009G193700 Sobic009G193700 Sobic004G341200--Sobic009G193700 Sobic001G488500 Sobic001G488500 Sobic004G341200--Sobic001G488500 Sobic001G003000 Sobic001G003000 Sobic004G341200--Sobic001G003000 Sobic004G236600 Sobic004G236600 Sobic004G341200--Sobic004G236600 Sobic003G338400 Sobic003G338400 Sobic004G341200--Sobic003G338400
Octagon: transcription factors


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