Gene annotation
Transcriptome id Sobic.009G004200.1
Synonym Sb09g000570
Functional annotation MAC/Perforin domain containing protein, putative, expressed
UniProt C5YY09
Pfam PF01823
Panther DB PTHR33199 PTHR33199:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24290 : MAC/Perforin domain-containing protein
RAP-DB (Rice) LOC_Os07g07194.1 : MAC/Perforin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a040987
Brachypodium KQK11684 , KQK11683
Barley HORVU3Hr1G112370.3 , HORVU3Hr1G112370.2 , HORVU3Hr1G112370.1
Wheat TraesCS3D02G519000
Populus PNT42979 , PNT42981 , PNT42980


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
2 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
3 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
4 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
5 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
6 Sobic.004G347300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
7 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
10 Sobic.001G132000 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
11 Sobic.007G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type family protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
12 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
13 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
14 Sobic.009G234800 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
15 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
16 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
17 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
18 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
20 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -


Gene co-expression network
sample Sobic009G004200 Sobic009G004200 Sobic006G114800 Sobic006G114800 Sobic009G004200--Sobic006G114800 Sobic001G151800 Sobic001G151800 Sobic009G004200--Sobic001G151800 Sobic009G236200 Sobic009G236200 Sobic009G004200--Sobic009G236200 Sobic006G119200 Sobic006G119200 Sobic009G004200--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic009G004200--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic009G004200--Sobic004G347300 Sobic010G016400 Sobic010G016400 Sobic009G004200--Sobic010G016400 Sobic006G140000 Sobic006G140000 Sobic009G004200--Sobic006G140000 Sobic001G386400 Sobic001G386400 Sobic009G004200--Sobic001G386400 Sobic002G378800 Sobic002G378800 Sobic006G114800--Sobic002G378800 Sobic004G102400 Sobic004G102400 Sobic006G114800--Sobic004G102400 Sobic005G150800 Sobic005G150800 Sobic006G114800--Sobic005G150800 Sobic006G114800--Sobic009G004200 Sobic006G114800--Sobic010G016400 Sobic006G114800--Sobic009G167700 Sobic003G338400 Sobic003G338400 Sobic006G114800--Sobic003G338400 Sobic001G393800 Sobic001G393800 Sobic006G114800--Sobic001G393800 Sobic001G023200 Sobic001G023200 Sobic006G114800--Sobic001G023200 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic007G125900 Sobic007G125900 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic003G348400 Sobic003G348400 Sobic001G151800--Sobic003G348400 Sobic004G236600 Sobic004G236600 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic001G151800--Sobic006G140000 Sobic001G151800--Sobic009G004200 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G236200--Sobic009G167700 Sobic009G236200--Sobic004G102400 Sobic005G215900 Sobic005G215900 Sobic009G236200--Sobic005G215900 Sobic006G119200--Sobic001G386400 Sobic001G132000 Sobic001G132000 Sobic006G119200--Sobic001G132000 Sobic006G119200--Sobic010G016400 Sobic006G119200--Sobic009G167700 Sobic002G155400 Sobic002G155400 Sobic006G119200--Sobic002G155400 Sobic009G234800 Sobic009G234800 Sobic006G119200--Sobic009G234800 Sobic001G512800 Sobic001G512800 Sobic006G119200--Sobic001G512800 Sobic005G231900 Sobic005G231900 Sobic006G119200--Sobic005G231900 Sobic006G119200--Sobic004G347300 Sobic002G244100 Sobic002G244100 Sobic009G167700--Sobic002G244100 Sobic004G341200 Sobic004G341200 Sobic009G167700--Sobic004G341200 Sobic009G167700--Sobic004G102400 Sobic009G167700--Sobic001G386400 Sobic009G167700--Sobic010G016400 Sobic001G089800 Sobic001G089800 Sobic009G167700--Sobic001G089800 Sobic003G354400 Sobic003G354400 Sobic009G167700--Sobic003G354400 Sobic009G167700--Sobic001G132000 Sobic009G167700--Sobic006G119200 Sobic004G347300--Sobic010G016400 Sobic005G139400 Sobic005G139400 Sobic004G347300--Sobic005G139400 Sobic004G347300--Sobic001G023200 Sobic004G347300--Sobic006G119200 Sobic007G148800 Sobic007G148800 Sobic004G347300--Sobic007G148800 Sobic004G347300--Sobic001G132000 Sobic001G010400 Sobic001G010400 Sobic004G347300--Sobic001G010400 Sobic004G347300--Sobic009G004200 Sobic004G012400 Sobic004G012400 Sobic004G347300--Sobic004G012400 Sobic010G016400--Sobic005G139400 Sobic010G016400--Sobic009G167700 Sobic010G016400--Sobic004G347300 Sobic010G016400--Sobic006G119200 Sobic010G016400--Sobic007G148800 Sobic006G217700 Sobic006G217700 Sobic010G016400--Sobic006G217700 Sobic010G016400--Sobic001G010400 Sobic010G016400--Sobic004G102400 Sobic009G172500 Sobic009G172500 Sobic010G016400--Sobic009G172500 Sobic001G488500 Sobic001G488500 Sobic006G140000--Sobic001G488500 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic006G140000--Sobic003G338400 Sobic006G140000--Sobic001G151800 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic006G140000--Sobic010G016400 Sobic006G140000--Sobic004G102400 Sobic001G386400--Sobic006G119200 Sobic001G386400--Sobic009G167700 Sobic009G000200 Sobic009G000200 Sobic001G386400--Sobic009G000200 Sobic003G316300 Sobic003G316300 Sobic001G386400--Sobic003G316300 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic001G386400--Sobic004G341200
Octagon: transcription factors


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