Gene annotation
Transcriptome id Sobic.001G151800.1,Sobic.001G151800.5,Sobic.001G151800.3,Sobic.001G151800.2,Sobic.001G151800.4
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S5Q8 , A0A1B6QJ26 , A0A1Z5S684 , A0A1B6QJ24
Pfam PF13923
Panther DB PTHR23041 PTHR23041:SF64
NCBI CDD -
KEGG Orthology K16275; BAH, E3 ubiquitin-protein ligase BAH
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38920 : SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related
RAP-DB (Rice) LOC_Os03g44810.2,LOC_Os03g44810.1 : expressed protein
MaizeGDB (Corn) Zm00025a007592
Brachypodium KQK13941
Barley HORVU5Hr1G092290.15 , HORVU5Hr1G092290.14 , HORVU5Hr1G092290.17 , HORVU5Hr1G092290.16 , HORVU5Hr1G092290.11 , HORVU5Hr1G092290.10 , HORVU5Hr1G092290.13 , HORVU5Hr1G092290.12 , HORVU5Hr1G092290.18 , HORVU5Hr1G092290.1 , HORVU5Hr1G092290.3 , HORVU5Hr1G092290.2 , HORVU5Hr1G092290.5 , HORVU5Hr1G092290.4 , HORVU5Hr1G092290.7 , HORVU5Hr1G092290.6 , HORVU5Hr1G092290.8
Wheat TraesCS5D02G380200 , TraesCS5D02G380200 , TraesCS5B02G373000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
2 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
3 Sobic.007G125900 protein kinase domain containing protein, expressed -
4 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
5 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
6 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
7 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
8 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.009G004200 MAC/Perforin domain containing protein, putative, expressed -
10 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
12 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
13 Sobic.002G381300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
14 Sobic.005G212700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
16 Sobic.009G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
18 Sobic.009G135100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
19 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
20 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G151800 Sobic001G151800 Sobic009G236200 Sobic009G236200 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic007G125900 Sobic007G125900 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic003G348400 Sobic003G348400 Sobic001G151800--Sobic003G348400 Sobic004G236600 Sobic004G236600 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic006G140000 Sobic006G140000 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G167700 Sobic009G167700 Sobic009G236200--Sobic009G167700 Sobic004G102400 Sobic004G102400 Sobic009G236200--Sobic004G102400 Sobic005G215900 Sobic005G215900 Sobic009G236200--Sobic005G215900 Sobic002G355200--Sobic001G151800 Sobic008G144500 Sobic008G144500 Sobic002G355200--Sobic008G144500 Sobic002G355200--Sobic009G236200 Sobic002G355200--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic002G355200--Sobic004G236550 Sobic002G355200--Sobic005G016800 Sobic009G236300 Sobic009G236300 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic007G125900--Sobic003G348400 Sobic007G125900--Sobic005G117400 Sobic007G125900--Sobic001G151800 Sobic001G074200 Sobic001G074200 Sobic007G125900--Sobic001G074200 Sobic007G125900--Sobic009G236200 Sobic007G125900--Sobic002G355200 Sobic007G125900--Sobic005G016800 Sobic007G125900--Sobic004G102400 Sobic009G127000 Sobic009G127000 Sobic007G125900--Sobic009G127000 Sobic003G232900--Sobic001G151800 Sobic003G232900--Sobic005G117400 Sobic003G232900--Sobic002G355200 Sobic003G232900--Sobic007G125900 Sobic003G232900--Sobic009G236200 Sobic003G232900--Sobic004G236600 Sobic003G232900--Sobic004G102400 Sobic003G232900--Sobic002G381300 Sobic004G304400 Sobic004G304400 Sobic003G232900--Sobic004G304400 Sobic003G348400--Sobic007G125900 Sobic003G348400--Sobic005G117400 Sobic003G348400--Sobic001G151800 Sobic003G338400 Sobic003G338400 Sobic003G348400--Sobic003G338400 Sobic003G348400--Sobic004G102400 Sobic003G348400--Sobic006G140000 Sobic006G091100 Sobic006G091100 Sobic003G348400--Sobic006G091100 Sobic005G212700 Sobic005G212700 Sobic003G348400--Sobic005G212700 Sobic001G003000 Sobic001G003000 Sobic003G348400--Sobic001G003000 Sobic001G488500 Sobic001G488500 Sobic004G236600--Sobic001G488500 Sobic005G152100 Sobic005G152100 Sobic004G236600--Sobic005G152100 Sobic002G322900 Sobic002G322900 Sobic004G236600--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic004G236600--Sobic004G255000 Sobic004G246200 Sobic004G246200 Sobic004G236600--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic004G236600--Sobic001G412700 Sobic008G024400 Sobic008G024400 Sobic004G236600--Sobic008G024400 Sobic004G236600--Sobic005G215900 Sobic009G038501 Sobic009G038501 Sobic004G236600--Sobic009G038501 Sobic004G158901 Sobic004G158901 Sobic005G117400--Sobic004G158901 Sobic005G117400--Sobic007G125900 Sobic004G058000 Sobic004G058000 Sobic005G117400--Sobic004G058000 Sobic002G249000 Sobic002G249000 Sobic005G117400--Sobic002G249000 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic005G117400--Sobic003G232900 Sobic007G025700 Sobic007G025700 Sobic005G117400--Sobic007G025700 Sobic010G224200 Sobic010G224200 Sobic005G117400--Sobic010G224200 Sobic006G140000--Sobic001G488500 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic006G140000--Sobic003G338400 Sobic006G140000--Sobic001G151800 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic006G140000--Sobic010G016400 Sobic006G140000--Sobic004G102400 Sobic006G114800 Sobic006G114800 Sobic009G004200--Sobic006G114800 Sobic009G004200--Sobic001G151800 Sobic009G004200--Sobic009G236200 Sobic009G004200--Sobic006G119200 Sobic009G004200--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic009G004200--Sobic004G347300 Sobic009G004200--Sobic010G016400 Sobic009G004200--Sobic006G140000 Sobic001G386400 Sobic001G386400 Sobic009G004200--Sobic001G386400
Octagon: transcription factors


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