Gene annotation
Transcriptome id Sobic.005G212700.1
Synonym GST29, GSTU18, Sb05g026490, ATGSTU18
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5Y7W3
Pfam PF00043 PF13417
Panther DB PTHR11260 PTHR11260:SF226
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10360 : glutathione S-transferase TAU 18
RAP-DB (Rice) LOC_Os10g38160.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a003106 , Zm00025a055554
Brachypodium KQK02932 , KQJ97559
Barley HORVU1Hr1G049270.3 , HORVU1Hr1G049270.2 , HORVU2Hr1G045200.1
Wheat TraesCS6B02G167600 , TraesCS6A02G139100 , TraesCS3B02G234100 , TraesCS6D02G127800 , TraesCS6B02G167400 , TraesCS6B02G167500 , TraesCSU02G087600 , TraesCS6B02G167300 , TraesCS3A02G260800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
2 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.003G189200 expressed protein -
4 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
5 Sobic.004G304400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
6 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
7 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
8 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
9 Sobic.004G308000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
11 Sobic.009G038501 - -
12 Sobic.007G125900 protein kinase domain containing protein, expressed -
13 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
14 Sobic.002G035700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
15 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
16 Sobic.008G024400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@thaumatin-like protein 1 precursor, putative, expressed -
17 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.005G105300 expressed protein -
19 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2


Gene co-expression network
sample Sobic005G212700 Sobic005G212700 Sobic003G348400 Sobic003G348400 Sobic005G212700--Sobic003G348400 Sobic007G025700 Sobic007G025700 Sobic005G212700--Sobic007G025700 Sobic003G189200 Sobic003G189200 Sobic005G212700--Sobic003G189200 Sobic001G151800 Sobic001G151800 Sobic005G212700--Sobic001G151800 Sobic004G304400 Sobic004G304400 Sobic005G212700--Sobic004G304400 Sobic005G117400 Sobic005G117400 Sobic005G212700--Sobic005G117400 Sobic007G003200 Sobic007G003200 Sobic005G212700--Sobic007G003200 Sobic009G236200 Sobic009G236200 Sobic005G212700--Sobic009G236200 Sobic004G308000 Sobic004G308000 Sobic005G212700--Sobic004G308000 Sobic007G125900 Sobic007G125900 Sobic003G348400--Sobic007G125900 Sobic003G348400--Sobic005G117400 Sobic003G348400--Sobic001G151800 Sobic003G338400 Sobic003G338400 Sobic003G348400--Sobic003G338400 Sobic004G102400 Sobic004G102400 Sobic003G348400--Sobic004G102400 Sobic006G140000 Sobic006G140000 Sobic003G348400--Sobic006G140000 Sobic006G091100 Sobic006G091100 Sobic003G348400--Sobic006G091100 Sobic003G348400--Sobic005G212700 Sobic001G003000 Sobic001G003000 Sobic003G348400--Sobic001G003000 Sobic007G025700--Sobic004G304400 Sobic002G224100 Sobic002G224100 Sobic007G025700--Sobic002G224100 Sobic004G307000 Sobic004G307000 Sobic007G025700--Sobic004G307000 Sobic008G111100 Sobic008G111100 Sobic007G025700--Sobic008G111100 Sobic007G025700--Sobic003G189200 Sobic007G025700--Sobic005G117400 Sobic009G177800 Sobic009G177800 Sobic007G025700--Sobic009G177800 Sobic004G158901 Sobic004G158901 Sobic007G025700--Sobic004G158901 Sobic001G474200 Sobic001G474200 Sobic007G025700--Sobic001G474200 Sobic003G189200--Sobic002G224100 Sobic003G189200--Sobic007G025700 Sobic003G189200--Sobic004G307000 Sobic003G189200--Sobic004G304400 Sobic003G363200 Sobic003G363200 Sobic003G189200--Sobic003G363200 Sobic003G429300 Sobic003G429300 Sobic003G189200--Sobic003G429300 Sobic003G189200--Sobic001G474200 Sobic003G189200--Sobic008G111100 Sobic003G189200--Sobic005G212700 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic001G151800--Sobic003G348400 Sobic004G236600 Sobic004G236600 Sobic001G151800--Sobic004G236600 Sobic001G151800--Sobic005G117400 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic004G304400--Sobic007G025700 Sobic004G304400--Sobic008G111100 Sobic004G304400--Sobic009G177800 Sobic004G304400--Sobic004G307000 Sobic004G304400--Sobic005G117400 Sobic003G019200 Sobic003G019200 Sobic004G304400--Sobic003G019200 Sobic004G304400--Sobic003G189200 Sobic010G224200 Sobic010G224200 Sobic004G304400--Sobic010G224200 Sobic002G195900 Sobic002G195900 Sobic004G304400--Sobic002G195900 Sobic005G117400--Sobic004G158901 Sobic005G117400--Sobic007G125900 Sobic004G058000 Sobic004G058000 Sobic005G117400--Sobic004G058000 Sobic002G249000 Sobic002G249000 Sobic005G117400--Sobic002G249000 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic005G117400--Sobic003G232900 Sobic005G117400--Sobic007G025700 Sobic005G117400--Sobic010G224200 Sobic001G101400 Sobic001G101400 Sobic007G003200--Sobic001G101400 Sobic004G074500 Sobic004G074500 Sobic007G003200--Sobic004G074500 Sobic010G016800 Sobic010G016800 Sobic007G003200--Sobic010G016800 Sobic001G212000 Sobic001G212000 Sobic007G003200--Sobic001G212000 Sobic006G261550 Sobic006G261550 Sobic007G003200--Sobic006G261550 Sobic008G024400 Sobic008G024400 Sobic007G003200--Sobic008G024400 Sobic003G085300 Sobic003G085300 Sobic007G003200--Sobic003G085300 Sobic002G209000 Sobic002G209000 Sobic007G003200--Sobic002G209000 Sobic001G483500 Sobic001G483500 Sobic007G003200--Sobic001G483500 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G167700 Sobic009G167700 Sobic009G236200--Sobic009G167700 Sobic009G236200--Sobic004G102400 Sobic005G215900 Sobic005G215900 Sobic009G236200--Sobic005G215900 Sobic004G308000--Sobic003G085300 Sobic002G057300 Sobic002G057300 Sobic004G308000--Sobic002G057300 Sobic004G308000--Sobic004G074500 Sobic002G090200 Sobic002G090200 Sobic004G308000--Sobic002G090200 Sobic004G308000--Sobic001G212000 Sobic004G308000--Sobic007G003200 Sobic004G308000--Sobic009G236200 Sobic004G308000--Sobic001G151800 Sobic006G218300 Sobic006G218300 Sobic004G308000--Sobic006G218300
Octagon: transcription factors


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