Gene annotation
Transcriptome id Sobic.007G003200.2
Synonym Sb07g000490
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
reticuline oxidase-like protein precursor, putative, expressed
UniProt C5YLE7
Pfam PF08031 PF01565
Panther DB PTHR32448 PTHR32448:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G20820 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35560.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a042344 , Zm00025a051104 , Zm00025a051097
Brachypodium KQJ81770 , KQK18048
Barley HORVU2Hr1G122590.1 , HORVU1Hr1G092680.2 , HORVU1Hr1G092680.1 , HORVU7Hr1G089270.1 , HORVU4Hr1G017270.1 , HORVU7Hr1G089280.1
Wheat TraesCS1A02G424100 , TraesCS1B02G456900
Populus -


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cDNA sequences
Sobic.007G003200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
2 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
3 Sobic.010G016800 - -
4 Sobic.001G212000 GEM, putative, expressed -
5 Sobic.006G261550 - -
6 Sobic.008G024400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@thaumatin-like protein 1 precursor, putative, expressed -
7 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
8 Sobic.002G209000 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
9 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
10 Sobic.004G004700 - -
11 Sobic.004G006966 - -
12 Sobic.004G006966 - -
13 Sobic.004G006966 - -
14 Sobic.004G006966 - -
15 Sobic.004G006966 - -
16 Sobic.004G308000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@EF hand family protein, putative, expressed -
17 Sobic.005G212700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
19 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -


Gene co-expression network
sample Sobic007G003200 Sobic007G003200 Sobic001G101400 Sobic001G101400 Sobic007G003200--Sobic001G101400 Sobic004G074500 Sobic004G074500 Sobic007G003200--Sobic004G074500 Sobic010G016800 Sobic010G016800 Sobic007G003200--Sobic010G016800 Sobic001G212000 Sobic001G212000 Sobic007G003200--Sobic001G212000 Sobic006G261550 Sobic006G261550 Sobic007G003200--Sobic006G261550 Sobic008G024400 Sobic008G024400 Sobic007G003200--Sobic008G024400 Sobic003G085300 Sobic003G085300 Sobic007G003200--Sobic003G085300 Sobic002G209000 Sobic002G209000 Sobic007G003200--Sobic002G209000 Sobic001G483500 Sobic001G483500 Sobic007G003200--Sobic001G483500 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic005G215300 Sobic005G215300 Sobic001G101400--Sobic005G215300 Sobic001G101400--Sobic001G212000 Sobic004G006966 Sobic004G006966 Sobic001G101400--Sobic004G006966 Sobic004G074500--Sobic003G085300 Sobic002G090200 Sobic002G090200 Sobic004G074500--Sobic002G090200 Sobic004G308000 Sobic004G308000 Sobic004G074500--Sobic004G308000 Sobic004G074500--Sobic007G003200 Sobic004G246200 Sobic004G246200 Sobic004G074500--Sobic004G246200 Sobic004G074500--Sobic001G101400 Sobic004G074500--Sobic010G016800 Sobic004G074500--Sobic001G212000 Sobic006G140000 Sobic006G140000 Sobic004G074500--Sobic006G140000 Sobic010G016800--Sobic004G006966 Sobic010G016800--Sobic001G101400 Sobic003G374150 Sobic003G374150 Sobic010G016800--Sobic003G374150 Sobic010G016800--Sobic001G483500 Sobic005G136800 Sobic005G136800 Sobic010G016800--Sobic005G136800 Sobic010G098100 Sobic010G098100 Sobic001G212000--Sobic010G098100 Sobic001G212000--Sobic003G085300 Sobic005G152100 Sobic005G152100 Sobic001G212000--Sobic005G152100 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G412700 Sobic001G412700 Sobic001G212000--Sobic001G412700 Sobic005G151700 Sobic005G151700 Sobic001G212000--Sobic005G151700 Sobic001G212000--Sobic008G024400 Sobic004G236600 Sobic004G236600 Sobic001G212000--Sobic004G236600 Sobic006G261550--Sobic007G003200 Sobic006G261550--Sobic004G006966 Sobic006G261550--Sobic001G483500 Sobic006G261550--Sobic010G016800 Sobic006G261550--Sobic001G412700 Sobic008G024400--Sobic005G152100 Sobic008G024400--Sobic004G246200 Sobic008G024400--Sobic001G412700 Sobic004G255000 Sobic004G255000 Sobic008G024400--Sobic004G255000 Sobic008G024400--Sobic004G236600 Sobic001G249300 Sobic001G249300 Sobic008G024400--Sobic001G249300 Sobic001G280200 Sobic001G280200 Sobic008G024400--Sobic001G280200 Sobic008G024400--Sobic001G212000 Sobic005G215900 Sobic005G215900 Sobic008G024400--Sobic005G215900 Sobic003G085300--Sobic004G308000 Sobic003G085300--Sobic001G212000 Sobic003G085300--Sobic005G152100 Sobic003G085300--Sobic004G074500 Sobic003G085300--Sobic004G246200 Sobic003G085300--Sobic001G412700 Sobic003G085300--Sobic008G024400 Sobic003G085300--Sobic005G215900 Sobic003G085300--Sobic001G101400 Sobic002G209000--Sobic001G101400 Sobic002G209000--Sobic001G483500 Sobic001G251900 Sobic001G251900 Sobic002G209000--Sobic001G251900 Sobic002G209000--Sobic007G003200 Sobic002G209000--Sobic001G212000 Sobic002G209000--Sobic010G016800 Sobic002G209000--Sobic010G098100 Sobic002G209000--Sobic004G006966 Sobic001G483500--Sobic010G098100 Sobic001G483500--Sobic005G151700 Sobic001G483500--Sobic004G006966 Sobic001G483500--Sobic001G101400 Sobic001G483500--Sobic001G251900
Octagon: transcription factors


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