Gene annotation
Transcriptome id Sobic.002G209000.6,Sobic.002G209000.5,Sobic.002G209000.4,Sobic.002G209000.1,Sobic.002G209000.7
Synonym GLR2.9, ATGLR2.9, Sb02g025320
Functional annotation glutamate receptor, putative, expressed
UniProt A0A1W0W553 , A0A1W0W577 , A0A1W0W556 , A0A1B6QCP5 , A0A1B6QCM0
Pfam PF00060 PF00497 PF01094 PF00060 PF13458 PF00497 PF13458 PF00060 PF00497
Panther DB PTHR18966 PTHR18966:SF204
NCBI CDD KOG1052; Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
KEGG Orthology K05387; glutamate receptor, ionotropic, plant
Gene Ontology GO:0016020; membrane GO:0004970ionotropic glutamate receptor activity


Orthologs (automatic annotation)
TAIR AT2G29120 : glutamate receptor 2.9,glutamate receptor 2.7,glutamate receptor 2.5
RAP-DB (Rice) LOC_Os09g25960.1,LOC_Os02g54640.1 : glutamate receptor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
2 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
3 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
4 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.001G212000 GEM, putative, expressed -
6 Sobic.010G016800 - -
7 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
8 Sobic.004G006966 - -
9 Sobic.004G006966 - -
10 Sobic.004G006966 - -
11 Sobic.004G006966 - -
12 Sobic.004G006966 - -
13 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
14 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
15 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
16 Sobic.004G004700 - -
17 Sobic.002G409500 lipase precursor, putative, expressed -
18 Sobic.006G100400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -


Gene co-expression network
sample Sobic002G209000 Sobic002G209000 Sobic001G101400 Sobic001G101400 Sobic002G209000--Sobic001G101400 Sobic001G483500 Sobic001G483500 Sobic002G209000--Sobic001G483500 Sobic001G251900 Sobic001G251900 Sobic002G209000--Sobic001G251900 Sobic007G003200 Sobic007G003200 Sobic002G209000--Sobic007G003200 Sobic001G212000 Sobic001G212000 Sobic002G209000--Sobic001G212000 Sobic010G016800 Sobic010G016800 Sobic002G209000--Sobic010G016800 Sobic010G098100 Sobic010G098100 Sobic002G209000--Sobic010G098100 Sobic004G006966 Sobic004G006966 Sobic002G209000--Sobic004G006966 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic005G215300 Sobic005G215300 Sobic001G101400--Sobic005G215300 Sobic001G101400--Sobic001G212000 Sobic001G101400--Sobic004G006966 Sobic001G483500--Sobic010G098100 Sobic005G151700 Sobic005G151700 Sobic001G483500--Sobic005G151700 Sobic001G483500--Sobic004G006966 Sobic001G483500--Sobic001G101400 Sobic001G483500--Sobic001G251900 Sobic001G251900--Sobic001G483500 Sobic003G219600 Sobic003G219600 Sobic001G251900--Sobic003G219600 Sobic001G251900--Sobic004G006966 Sobic006G100400 Sobic006G100400 Sobic001G251900--Sobic006G100400 Sobic001G251900--Sobic005G151700 Sobic007G003200--Sobic001G101400 Sobic004G074500 Sobic004G074500 Sobic007G003200--Sobic004G074500 Sobic007G003200--Sobic010G016800 Sobic007G003200--Sobic001G212000 Sobic006G261550 Sobic006G261550 Sobic007G003200--Sobic006G261550 Sobic008G024400 Sobic008G024400 Sobic007G003200--Sobic008G024400 Sobic003G085300 Sobic003G085300 Sobic007G003200--Sobic003G085300 Sobic007G003200--Sobic002G209000 Sobic007G003200--Sobic001G483500 Sobic001G212000--Sobic010G098100 Sobic001G212000--Sobic003G085300 Sobic005G152100 Sobic005G152100 Sobic001G212000--Sobic005G152100 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G412700 Sobic001G412700 Sobic001G212000--Sobic001G412700 Sobic001G212000--Sobic005G151700 Sobic001G212000--Sobic008G024400 Sobic004G236600 Sobic004G236600 Sobic001G212000--Sobic004G236600 Sobic010G016800--Sobic004G006966 Sobic010G016800--Sobic001G101400 Sobic003G374150 Sobic003G374150 Sobic010G016800--Sobic003G374150 Sobic010G016800--Sobic001G483500 Sobic005G136800 Sobic005G136800 Sobic010G016800--Sobic005G136800 Sobic010G098100--Sobic001G483500 Sobic010G098100--Sobic005G151700 Sobic010G098100--Sobic001G212000 Sobic001G280200 Sobic001G280200 Sobic010G098100--Sobic001G280200 Sobic001G249300 Sobic001G249300 Sobic010G098100--Sobic001G249300 Sobic010G098100--Sobic005G152100 Sobic003G259200 Sobic003G259200 Sobic010G098100--Sobic003G259200 Sobic007G187300 Sobic007G187300 Sobic010G098100--Sobic007G187300 Sobic001G162700 Sobic001G162700 Sobic010G098100--Sobic001G162700 Sobic004G006966--Sobic004G006966 Sobic004G006966--Sobic003G374150 Sobic004G006966--Sobic005G136800 Sobic004G006966--Sobic010G016800 Sobic004G006966--Sobic001G483500 Sobic002G182850 Sobic002G182850 Sobic004G006966--Sobic002G182850
Octagon: transcription factors


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