Gene annotation
Transcriptome id Sobic.001G483500.1
Synonym Sb01g045250
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt A0A1B6QQ57
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G05910 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os03g08200.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053299
Brachypodium -
Barley -
Wheat TraesCS4D02G294000 , TraesCS4B02G295100 , TraesCS4B02G295100 , TraesCS4A02G009500 , TraesCS4A02G009500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
3 Sobic.004G006966 - -
4 Sobic.004G006966 - -
5 Sobic.004G006966 - -
6 Sobic.004G006966 - -
7 Sobic.004G006966 - -
8 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
9 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
10 Sobic.001G212000 GEM, putative, expressed -
11 Sobic.009G061300 - -
12 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
13 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
14 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.006G100400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G374150 - -
17 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
18 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
19 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase


Gene co-expression network
sample Sobic001G483500 Sobic001G483500 Sobic010G098100 Sobic010G098100 Sobic001G483500--Sobic010G098100 Sobic005G151700 Sobic005G151700 Sobic001G483500--Sobic005G151700 Sobic004G006966 Sobic004G006966 Sobic001G483500--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic001G483500--Sobic001G101400 Sobic001G251900 Sobic001G251900 Sobic001G483500--Sobic001G251900 Sobic010G098100--Sobic001G483500 Sobic010G098100--Sobic005G151700 Sobic001G212000 Sobic001G212000 Sobic010G098100--Sobic001G212000 Sobic001G280200 Sobic001G280200 Sobic010G098100--Sobic001G280200 Sobic001G249300 Sobic001G249300 Sobic010G098100--Sobic001G249300 Sobic005G152100 Sobic005G152100 Sobic010G098100--Sobic005G152100 Sobic003G259200 Sobic003G259200 Sobic010G098100--Sobic003G259200 Sobic007G187300 Sobic007G187300 Sobic010G098100--Sobic007G187300 Sobic001G162700 Sobic001G162700 Sobic010G098100--Sobic001G162700 Sobic005G151700--Sobic010G098100 Sobic005G151700--Sobic001G483500 Sobic005G151700--Sobic007G187300 Sobic005G151700--Sobic003G259200 Sobic003G219600 Sobic003G219600 Sobic005G151700--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic005G151700--Sobic009G211400 Sobic005G151700--Sobic001G249300 Sobic005G018500 Sobic005G018500 Sobic005G151700--Sobic005G018500 Sobic009G029600 Sobic009G029600 Sobic005G151700--Sobic009G029600 Sobic004G006966--Sobic004G006966 Sobic003G374150 Sobic003G374150 Sobic004G006966--Sobic003G374150 Sobic005G136800 Sobic005G136800 Sobic004G006966--Sobic005G136800 Sobic010G016800 Sobic010G016800 Sobic004G006966--Sobic010G016800 Sobic004G006966--Sobic001G483500 Sobic002G182850 Sobic002G182850 Sobic004G006966--Sobic002G182850 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic005G215300 Sobic005G215300 Sobic001G101400--Sobic005G215300 Sobic001G101400--Sobic001G212000 Sobic001G101400--Sobic004G006966 Sobic001G251900--Sobic001G483500 Sobic001G251900--Sobic003G219600 Sobic001G251900--Sobic004G006966 Sobic006G100400 Sobic006G100400 Sobic001G251900--Sobic006G100400 Sobic001G251900--Sobic005G151700
Octagon: transcription factors


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