Gene annotation
Transcriptome id Sobic.001G412700.1
Synonym GSTL2, Sb01g038900
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
IN2-1 protein, putative, expressed
UniProt C5WP86
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF261
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G55040 : glutathione transferase lambda 2
RAP-DB (Rice) LOC_Os03g17480.1 : IN2-1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a001911
Brachypodium KQK22239
Barley HORVU4Hr1G057740.1 , HORVU4Hr1G057740.3 , HORVU4Hr1G057740.2 , HORVU4Hr1G057740.5 , HORVU4Hr1G057740.4 , HORVU4Hr1G057740.7 , HORVU4Hr1G057740.6
Wheat TraesCS4B02G200000 , TraesCS4D02G201200 , TraesCS4D02G201200 , TraesCS4D02G201200 , TraesCS4D02G200700 , TraesCS4A02G104300 , TraesCS4B02G199700 , TraesCS4D02G201100 , TraesCS4D02G201100 , TraesCS4A02G103900 , TraesCS4A02G103900 , TraesCS4A02G103900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
3 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
4 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
5 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
6 Sobic.001G212000 GEM, putative, expressed -
7 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
8 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
9 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
10 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
11 Sobic.008G024400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@thaumatin-like protein 1 precursor, putative, expressed -
12 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
14 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
15 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
16 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
17 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
18 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
19 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
20 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic001G412700 Sobic001G412700 Sobic004G255000 Sobic004G255000 Sobic001G412700--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic001G412700--Sobic003G259200 Sobic005G152100 Sobic005G152100 Sobic001G412700--Sobic005G152100 Sobic003G269700 Sobic003G269700 Sobic001G412700--Sobic003G269700 Sobic004G246200 Sobic004G246200 Sobic001G412700--Sobic004G246200 Sobic001G212000 Sobic001G212000 Sobic001G412700--Sobic001G212000 Sobic009G029600 Sobic009G029600 Sobic001G412700--Sobic009G029600 Sobic002G322900 Sobic002G322900 Sobic001G412700--Sobic002G322900 Sobic005G018500 Sobic005G018500 Sobic001G412700--Sobic005G018500 Sobic004G255000--Sobic009G029600 Sobic004G255000--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic004G255000--Sobic001G249300 Sobic009G054500 Sobic009G054500 Sobic004G255000--Sobic009G054500 Sobic001G280200 Sobic001G280200 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G260000 Sobic004G260000 Sobic004G255000--Sobic004G260000 Sobic003G219600 Sobic003G219600 Sobic004G255000--Sobic003G219600 Sobic004G255000--Sobic005G152100 Sobic003G259200--Sobic009G054500 Sobic003G259200--Sobic005G018500 Sobic003G259200--Sobic001G249300 Sobic003G259200--Sobic003G219600 Sobic003G259200--Sobic004G255000 Sobic009G226300 Sobic009G226300 Sobic003G259200--Sobic009G226300 Sobic003G259200--Sobic009G029600 Sobic005G151700 Sobic005G151700 Sobic003G259200--Sobic005G151700 Sobic007G187300 Sobic007G187300 Sobic003G259200--Sobic007G187300 Sobic005G152100--Sobic004G246200 Sobic004G236600 Sobic004G236600 Sobic005G152100--Sobic004G236600 Sobic005G152100--Sobic005G018500 Sobic005G152100--Sobic004G255000 Sobic005G152100--Sobic001G249300 Sobic005G152100--Sobic003G259200 Sobic005G152100--Sobic002G322900 Sobic005G152100--Sobic009G054500 Sobic005G152100--Sobic001G412700 Sobic003G269700--Sobic004G255000 Sobic003G269700--Sobic001G412700 Sobic003G269700--Sobic009G029600 Sobic001G483500 Sobic001G483500 Sobic003G269700--Sobic001G483500 Sobic003G269700--Sobic003G219600 Sobic003G269700--Sobic005G151700 Sobic006G100400 Sobic006G100400 Sobic003G269700--Sobic006G100400 Sobic010G170550 Sobic010G170550 Sobic003G269700--Sobic010G170550 Sobic003G269700--Sobic003G259200 Sobic004G246200--Sobic005G152100 Sobic004G246200--Sobic005G018500 Sobic004G246200--Sobic003G259200 Sobic004G246200--Sobic004G255000 Sobic004G246200--Sobic001G412700 Sobic004G246200--Sobic004G260000 Sobic004G246200--Sobic002G322900 Sobic004G246200--Sobic009G054500 Sobic008G024400 Sobic008G024400 Sobic004G246200--Sobic008G024400 Sobic010G098100 Sobic010G098100 Sobic001G212000--Sobic010G098100 Sobic003G085300 Sobic003G085300 Sobic001G212000--Sobic003G085300 Sobic001G212000--Sobic005G152100 Sobic001G101400 Sobic001G101400 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G212000--Sobic001G412700 Sobic001G212000--Sobic005G151700 Sobic001G212000--Sobic008G024400 Sobic001G212000--Sobic004G236600 Sobic009G029600--Sobic004G255000 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G029600--Sobic009G226300 Sobic002G322900--Sobic004G236600 Sobic002G322900--Sobic005G152100 Sobic002G322900--Sobic004G246200 Sobic001G512800 Sobic001G512800 Sobic002G322900--Sobic001G512800 Sobic002G322900--Sobic001G412700 Sobic004G341200 Sobic004G341200 Sobic002G322900--Sobic004G341200 Sobic002G322900--Sobic004G255000 Sobic001G488500 Sobic001G488500 Sobic002G322900--Sobic001G488500 Sobic010G206000 Sobic010G206000 Sobic002G322900--Sobic010G206000 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300
Octagon: transcription factors


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