Gene annotation
Transcriptome id Sobic.004G004700.1
Synonym
Functional annotation -
UniProt A0A194YM28
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G016800 - -
2 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.004G006966 - -
4 Sobic.004G006966 - -
5 Sobic.004G006966 - -
6 Sobic.004G006966 - -
7 Sobic.005G215832 - -
8 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.005G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@laccase-15 precursor, putative, expressed K05909: laccase
10 Sobic.003G374150 - -
11 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
12 Sobic.002G209000 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
13 Sobic.005G136800 only inducible by pathogen inoculation(PubMedID : 20529887)@"SbCHS2 encodes a typical CHS that synthesizes naringenin chalcone, which is necessary for the formation of different flavonoid metabolites."(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
14 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
15 Sobic.002G182850 - -
16 Sobic.008G006500 zinc knuckle family protein, expressed -
17 Sobic.009G061300 - -
18 Sobic.001G212000 GEM, putative, expressed -
19 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
20 Sobic.009G197700 expressed protein -


Gene co-expression network
sample Sobic004G004700 Sobic004G004700 Sobic010G016800 Sobic010G016800 Sobic004G004700--Sobic010G016800 Sobic001G101400 Sobic001G101400 Sobic004G004700--Sobic001G101400 Sobic004G006966 Sobic004G006966 Sobic004G004700--Sobic004G006966 Sobic005G215832 Sobic005G215832 Sobic004G004700--Sobic005G215832 Sobic007G003200 Sobic007G003200 Sobic004G004700--Sobic007G003200 Sobic005G215300 Sobic005G215300 Sobic004G004700--Sobic005G215300 Sobic010G016800--Sobic004G006966 Sobic010G016800--Sobic001G101400 Sobic003G374150 Sobic003G374150 Sobic010G016800--Sobic003G374150 Sobic001G483500 Sobic001G483500 Sobic010G016800--Sobic001G483500 Sobic005G136800 Sobic005G136800 Sobic010G016800--Sobic005G136800 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic001G101400--Sobic005G215300 Sobic001G212000 Sobic001G212000 Sobic001G101400--Sobic001G212000 Sobic001G101400--Sobic004G006966 Sobic004G006966--Sobic004G006966 Sobic004G006966--Sobic003G374150 Sobic004G006966--Sobic005G136800 Sobic004G006966--Sobic010G016800 Sobic004G006966--Sobic001G483500 Sobic002G182850 Sobic002G182850 Sobic004G006966--Sobic002G182850 Sobic005G215832--Sobic004G006966 Sobic005G215832--Sobic003G374150 Sobic005G215832--Sobic005G136800 Sobic005G215832--Sobic010G016800 Sobic005G215832--Sobic001G483500 Sobic005G215832--Sobic002G182850 Sobic007G003200--Sobic001G101400 Sobic004G074500 Sobic004G074500 Sobic007G003200--Sobic004G074500 Sobic007G003200--Sobic010G016800 Sobic007G003200--Sobic001G212000 Sobic006G261550 Sobic006G261550 Sobic007G003200--Sobic006G261550 Sobic008G024400 Sobic008G024400 Sobic007G003200--Sobic008G024400 Sobic003G085300 Sobic003G085300 Sobic007G003200--Sobic003G085300 Sobic002G209000 Sobic002G209000 Sobic007G003200--Sobic002G209000 Sobic007G003200--Sobic001G483500 Sobic005G215300--Sobic001G101400 Sobic005G215300--Sobic010G016800 Sobic009G061300 Sobic009G061300 Sobic005G215300--Sobic009G061300 Sobic005G215300--Sobic004G006966 Sobic005G215300--Sobic001G483500
Octagon: transcription factors


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