Gene annotation
Transcriptome id Sobic.003G189200.1
Synonym Sb03g025370
Functional annotation expressed protein
UniProt C5XNL8
Pfam -
Panther DB PTHR36484 PTHR36484:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g37810.1 : expressed protein
MaizeGDB (Corn) Zm00025a038345
Brachypodium -
Barley HORVU3Hr1G050810.1 , HORVU3Hr1G083280.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
2 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
4 Sobic.004G304400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
6 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
7 Sobic.001G474200 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
8 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.005G212700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
11 Sobic.004G158901 - -
12 Sobic.005G105300 expressed protein -
13 Sobic.010G182966 - K15639: CYP734A1, PHYB activation tagged suppressor 1
14 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
15 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
17 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
18 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH


Gene co-expression network
sample Sobic003G189200 Sobic003G189200 Sobic002G224100 Sobic002G224100 Sobic003G189200--Sobic002G224100 Sobic007G025700 Sobic007G025700 Sobic003G189200--Sobic007G025700 Sobic004G307000 Sobic004G307000 Sobic003G189200--Sobic004G307000 Sobic004G304400 Sobic004G304400 Sobic003G189200--Sobic004G304400 Sobic003G363200 Sobic003G363200 Sobic003G189200--Sobic003G363200 Sobic003G429300 Sobic003G429300 Sobic003G189200--Sobic003G429300 Sobic001G474200 Sobic001G474200 Sobic003G189200--Sobic001G474200 Sobic008G111100 Sobic008G111100 Sobic003G189200--Sobic008G111100 Sobic005G212700 Sobic005G212700 Sobic003G189200--Sobic005G212700 Sobic004G158901 Sobic004G158901 Sobic002G224100--Sobic004G158901 Sobic002G224100--Sobic003G429300 Sobic002G224100--Sobic007G025700 Sobic002G224100--Sobic004G307000 Sobic002G224100--Sobic003G189200 Sobic005G117400 Sobic005G117400 Sobic002G224100--Sobic005G117400 Sobic002G379866 Sobic002G379866 Sobic002G224100--Sobic002G379866 Sobic007G171000 Sobic007G171000 Sobic002G224100--Sobic007G171000 Sobic002G224100--Sobic008G111100 Sobic007G025700--Sobic004G304400 Sobic007G025700--Sobic002G224100 Sobic007G025700--Sobic004G307000 Sobic007G025700--Sobic008G111100 Sobic007G025700--Sobic003G189200 Sobic007G025700--Sobic005G117400 Sobic009G177800 Sobic009G177800 Sobic007G025700--Sobic009G177800 Sobic007G025700--Sobic004G158901 Sobic007G025700--Sobic001G474200 Sobic004G307000--Sobic009G177800 Sobic003G322900 Sobic003G322900 Sobic004G307000--Sobic003G322900 Sobic007G137700 Sobic007G137700 Sobic004G307000--Sobic007G137700 Sobic004G307000--Sobic008G111100 Sobic002G195900 Sobic002G195900 Sobic004G307000--Sobic002G195900 Sobic002G055600 Sobic002G055600 Sobic004G307000--Sobic002G055600 Sobic004G050000 Sobic004G050000 Sobic004G307000--Sobic004G050000 Sobic002G423300 Sobic002G423300 Sobic004G307000--Sobic002G423300 Sobic002G117100 Sobic002G117100 Sobic004G307000--Sobic002G117100 Sobic004G304400--Sobic007G025700 Sobic004G304400--Sobic008G111100 Sobic004G304400--Sobic009G177800 Sobic004G304400--Sobic004G307000 Sobic004G304400--Sobic005G117400 Sobic003G019200 Sobic003G019200 Sobic004G304400--Sobic003G019200 Sobic004G304400--Sobic003G189200 Sobic010G224200 Sobic010G224200 Sobic004G304400--Sobic010G224200 Sobic004G304400--Sobic002G195900 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic010G200700 Sobic010G200700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic001G290400 Sobic001G290400 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic006G078400 Sobic006G078400 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic003G429300--Sobic007G171000 Sobic006G179500 Sobic006G179500 Sobic003G429300--Sobic006G179500 Sobic003G429300--Sobic008G111100 Sobic003G429300--Sobic002G224100 Sobic003G429300--Sobic003G019200 Sobic003G429300--Sobic002G195900 Sobic006G228300 Sobic006G228300 Sobic003G429300--Sobic006G228300 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300 Sobic002G104900 Sobic002G104900 Sobic001G474200--Sobic002G104900 Sobic001G119100 Sobic001G119100 Sobic001G474200--Sobic001G119100 Sobic003G227300 Sobic003G227300 Sobic001G474200--Sobic003G227300 Sobic001G474200--Sobic003G429300 Sobic001G474200--Sobic009G177800 Sobic001G119000 Sobic001G119000 Sobic001G474200--Sobic001G119000 Sobic001G474200--Sobic008G111100 Sobic007G198100 Sobic007G198100 Sobic001G474200--Sobic007G198100 Sobic002G211900 Sobic002G211900 Sobic001G474200--Sobic002G211900 Sobic008G111100--Sobic009G177800 Sobic008G111100--Sobic003G429300 Sobic008G111100--Sobic004G307000 Sobic008G111100--Sobic003G019200 Sobic009G155200 Sobic009G155200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic008G111100--Sobic010G224200 Sobic008G111100--Sobic002G423300 Sobic003G348400 Sobic003G348400 Sobic005G212700--Sobic003G348400 Sobic005G212700--Sobic007G025700 Sobic005G212700--Sobic003G189200 Sobic001G151800 Sobic001G151800 Sobic005G212700--Sobic001G151800 Sobic005G212700--Sobic004G304400 Sobic005G212700--Sobic005G117400 Sobic007G003200 Sobic007G003200 Sobic005G212700--Sobic007G003200 Sobic009G236200 Sobic009G236200 Sobic005G212700--Sobic009G236200 Sobic004G308000 Sobic004G308000 Sobic005G212700--Sobic004G308000
Octagon: transcription factors


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