Gene annotation
Transcriptome id Sobic.009G038501.1
Synonym -
Functional annotation -
UniProt A0A1Z5R1T4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g05070.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
2 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.003G360900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
6 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
7 Sobic.001G212000 GEM, putative, expressed -
8 Sobic.007G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type family protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
9 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
10 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
11 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
12 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
13 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
14 Sobic.005G212700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.007G003500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
17 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
18 Sobic.006G146100 Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
19 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
20 Sobic.009G197700 expressed protein -


Gene co-expression network
sample Sobic009G038501 Sobic009G038501 Sobic008G144500 Sobic008G144500 Sobic009G038501--Sobic008G144500 Sobic004G236600 Sobic004G236600 Sobic009G038501--Sobic004G236600 Sobic004G236000 Sobic004G236000 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic001G251900 Sobic001G251900 Sobic009G038501--Sobic001G251900 Sobic005G152100 Sobic005G152100 Sobic009G038501--Sobic005G152100 Sobic001G212000 Sobic001G212000 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G236200 Sobic009G236200 Sobic009G038501--Sobic009G236200 Sobic010G182966 Sobic010G182966 Sobic008G144500--Sobic010G182966 Sobic008G144500--Sobic009G038501 Sobic002G355200 Sobic002G355200 Sobic008G144500--Sobic002G355200 Sobic009G236300 Sobic009G236300 Sobic008G144500--Sobic009G236300 Sobic003G000600 Sobic003G000600 Sobic008G144500--Sobic003G000600 Sobic009G142200 Sobic009G142200 Sobic008G144500--Sobic009G142200 Sobic006G086100 Sobic006G086100 Sobic008G144500--Sobic006G086100 Sobic003G348700 Sobic003G348700 Sobic008G144500--Sobic003G348700 Sobic005G215766 Sobic005G215766 Sobic008G144500--Sobic005G215766 Sobic001G488500 Sobic001G488500 Sobic004G236600--Sobic001G488500 Sobic004G236600--Sobic005G152100 Sobic002G322900 Sobic002G322900 Sobic004G236600--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic004G236600--Sobic004G255000 Sobic004G246200 Sobic004G246200 Sobic004G236600--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic004G236600--Sobic001G412700 Sobic008G024400 Sobic008G024400 Sobic004G236600--Sobic008G024400 Sobic005G215900 Sobic005G215900 Sobic004G236600--Sobic005G215900 Sobic004G236600--Sobic009G038501 Sobic004G236000--Sobic009G038501 Sobic004G236000--Sobic004G236600 Sobic001G151800 Sobic001G151800 Sobic004G236000--Sobic001G151800 Sobic003G348400 Sobic003G348400 Sobic004G236000--Sobic003G348400 Sobic004G236000--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic004G236000--Sobic007G125900 Sobic004G236000--Sobic002G355200 Sobic004G236000--Sobic008G144500 Sobic003G232900 Sobic003G232900 Sobic004G236000--Sobic003G232900 Sobic003G360900--Sobic009G038501 Sobic009G197700 Sobic009G197700 Sobic003G360900--Sobic009G197700 Sobic003G360900--Sobic001G251900 Sobic010G148501 Sobic010G148501 Sobic003G360900--Sobic010G148501 Sobic003G360900--Sobic001G212000 Sobic003G360900--Sobic008G144500 Sobic003G360900--Sobic003G348400 Sobic003G360900--Sobic004G236600 Sobic010G043400 Sobic010G043400 Sobic003G360900--Sobic010G043400 Sobic001G483500 Sobic001G483500 Sobic001G251900--Sobic001G483500 Sobic003G219600 Sobic003G219600 Sobic001G251900--Sobic003G219600 Sobic004G006966 Sobic004G006966 Sobic001G251900--Sobic004G006966 Sobic006G100400 Sobic006G100400 Sobic001G251900--Sobic006G100400 Sobic005G151700 Sobic005G151700 Sobic001G251900--Sobic005G151700 Sobic005G152100--Sobic004G246200 Sobic005G152100--Sobic004G236600 Sobic005G018500 Sobic005G018500 Sobic005G152100--Sobic005G018500 Sobic005G152100--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic005G152100--Sobic001G249300 Sobic003G259200 Sobic003G259200 Sobic005G152100--Sobic003G259200 Sobic005G152100--Sobic002G322900 Sobic009G054500 Sobic009G054500 Sobic005G152100--Sobic009G054500 Sobic005G152100--Sobic001G412700 Sobic010G098100 Sobic010G098100 Sobic001G212000--Sobic010G098100 Sobic003G085300 Sobic003G085300 Sobic001G212000--Sobic003G085300 Sobic001G212000--Sobic005G152100 Sobic001G101400 Sobic001G101400 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G212000--Sobic001G412700 Sobic001G212000--Sobic005G151700 Sobic001G212000--Sobic008G024400 Sobic001G212000--Sobic004G236600 Sobic009G208500 Sobic009G208500 Sobic007G178100--Sobic009G208500 Sobic007G178100--Sobic001G251900 Sobic001G417600 Sobic001G417600 Sobic007G178100--Sobic001G417600 Sobic001G298300 Sobic001G298300 Sobic007G178100--Sobic001G298300 Sobic007G178100--Sobic009G038501 Sobic007G178100--Sobic004G236600 Sobic007G178100--Sobic001G151800 Sobic007G178100--Sobic004G246200 Sobic009G004200 Sobic009G004200 Sobic007G178100--Sobic009G004200 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G167700 Sobic009G167700 Sobic009G236200--Sobic009G167700 Sobic004G102400 Sobic004G102400 Sobic009G236200--Sobic004G102400 Sobic009G236200--Sobic005G215900
Octagon: transcription factors


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