Gene annotation
| Transcriptome id | Sobic.006G146100.1 |
|---|---|
| Synonym | Sb06g022500, BGLU46 |
| Functional annotation | Os4bglu18 - monolignol beta-glucoside homologue, expressed |
| UniProt | C5YC22 |
| Pfam | PF00232 |
| Panther DB | PTHR10353 PTHR10353:SF27 |
| NCBI CDD | - |
| KEGG Orthology | K05350; beta-glucosidase |
| Gene Ontology | GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
Orthologs (automatic annotation)
| TAIR | AT1G61820 : beta glucosidase 46 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g43410.1 : Os4bglu18 - monolignol beta-glucoside homologue, expressed |
| MaizeGDB (Corn) | Zm00025a056497 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.006G146100 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G235500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 2 | Sobic.001G092000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 3 | Sobic.009G038501 | - | - |
| 4 | Sobic.001G217400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed | - |
| 5 | Sobic.005G215766 | - | - |
| 6 | Sobic.003G059300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@verticillium wilt disease resistance protein, putative, expressed | - |
| 7 | Sobic.008G144500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed | - |
| 8 | Sobic.009G197700 | expressed protein | - |
| 9 | Sobic.003G360900 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 10 | Sobic.007G220000 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed | K10523: speckle-type POZ protein |
| 11 | Sobic.009G097300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 12 | Sobic.002G274800 | "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed | - |
| 13 | Sobic.001G432550 | - | - |
| 14 | Sobic.006G125400 | steroid nuclear receptor, ligand-binding, putative, expressed | - |
| 15 | Sobic.003G269800 | phosphatidylinositol transfer, putative, expressed | - |
| 16 | Sobic.009G236300 | lectin-like receptor kinase, putative, expressed | - |
| 17 | Sobic.001G251900 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed | - |
| 18 | Sobic.009G118600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed | K03265: ETF1, peptide chain release factor subunit 1 |
| 19 | Sobic.010G043400 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 20 | Sobic.001G003000 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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