Gene annotation
Transcriptome id Sobic.007G220000.1
Synonym Sb07g028630
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed
UniProt C5YJB4 , A0A097PQ61
Pfam PF00651
Panther DB PTHR24413 PTHR24413:SF43
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G55760 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os08g38700.1 : C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a033736
Brachypodium KQJ98801
Barley HORVU7Hr1G048690.1 , HORVU7Hr1G048690.2 , HORVU7Hr1G048690.3 , HORVU7Hr1G048690.4 , HORVU7Hr1G048690.5
Wheat TraesCS7D02G236600 , TraesCS7B02G134500 , TraesCS7A02G236400 , TraesCS5D02G264200
Populus -


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cDNA sequences
Sobic.007G220000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265800 uridine kinase, putative, expressed -
2 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
3 Sobic.003G129600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
4 Sobic.003G059300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@verticillium wilt disease resistance protein, putative, expressed -
5 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
7 Sobic.006G146100 Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
8 Sobic.001G517800 NIN, putative, expressed -
9 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
10 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
12 Sobic.009G193700 transmembrane protein 56, putative, expressed -
13 Sobic.006G083800 expressed protein -
14 Sobic.009G130000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
15 Sobic.009G147300 expressed protein -
16 Sobic.002G217400 HD domain containing protein, putative, expressed -
17 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
18 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
19 Sobic.001G396000 OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed -
20 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G220000 Sobic007G220000 Sobic004G265800 Sobic004G265800 Sobic007G220000--Sobic004G265800 Sobic007G004500 Sobic007G004500 Sobic007G220000--Sobic007G004500 Sobic003G129600 Sobic003G129600 Sobic007G220000--Sobic003G129600 Sobic003G059300 Sobic003G059300 Sobic007G220000--Sobic003G059300 Sobic003G320700 Sobic003G320700 Sobic007G220000--Sobic003G320700 Sobic004G329300 Sobic004G329300 Sobic007G220000--Sobic004G329300 Sobic006G146100 Sobic006G146100 Sobic007G220000--Sobic006G146100 Sobic001G517800 Sobic001G517800 Sobic007G220000--Sobic001G517800 Sobic001G462500 Sobic001G462500 Sobic007G220000--Sobic001G462500 Sobic004G131040 Sobic004G131040 Sobic004G265800--Sobic004G131040 Sobic004G265800--Sobic001G462500 Sobic004G265800--Sobic007G004500 Sobic003G200100 Sobic003G200100 Sobic004G265800--Sobic003G200100 Sobic004G065000 Sobic004G065000 Sobic004G265800--Sobic004G065000 Sobic001G351800 Sobic001G351800 Sobic004G265800--Sobic001G351800 Sobic003G322700 Sobic003G322700 Sobic004G265800--Sobic003G322700 Sobic006G204900 Sobic006G204900 Sobic004G265800--Sobic006G204900 Sobic002G266000 Sobic002G266000 Sobic004G265800--Sobic002G266000 Sobic007G004500--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic010G139600 Sobic010G139600 Sobic007G004500--Sobic010G139600 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500 Sobic003G157000 Sobic003G157000 Sobic003G129600--Sobic003G157000 Sobic002G072100 Sobic002G072100 Sobic003G129600--Sobic002G072100 Sobic005G093800 Sobic005G093800 Sobic003G129600--Sobic005G093800 Sobic009G130000 Sobic009G130000 Sobic003G129600--Sobic009G130000 Sobic006G177900 Sobic006G177900 Sobic003G129600--Sobic006G177900 Sobic010G223200 Sobic010G223200 Sobic003G129600--Sobic010G223200 Sobic010G092350 Sobic010G092350 Sobic003G129600--Sobic010G092350 Sobic006G051800 Sobic006G051800 Sobic003G129600--Sobic006G051800 Sobic006G276100 Sobic006G276100 Sobic003G129600--Sobic006G276100 Sobic003G059300--Sobic006G146100 Sobic003G059300--Sobic007G220000 Sobic001G092000 Sobic001G092000 Sobic003G059300--Sobic001G092000 Sobic006G000100 Sobic006G000100 Sobic003G059300--Sobic006G000100 Sobic010G165300 Sobic010G165300 Sobic003G059300--Sobic010G165300 Sobic010G220000 Sobic010G220000 Sobic003G059300--Sobic010G220000 Sobic001G292000 Sobic001G292000 Sobic003G059300--Sobic001G292000 Sobic009G097300 Sobic009G097300 Sobic003G059300--Sobic009G097300 Sobic010G199900 Sobic010G199900 Sobic003G059300--Sobic010G199900 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic001G282600 Sobic001G282600 Sobic004G329300--Sobic001G282600 Sobic010G169000 Sobic010G169000 Sobic004G329300--Sobic010G169000 Sobic004G329300--Sobic002G266000 Sobic004G329300--Sobic006G104600 Sobic004G225200 Sobic004G225200 Sobic004G329300--Sobic004G225200 Sobic004G329300--Sobic009G193700 Sobic003G257100 Sobic003G257100 Sobic004G329300--Sobic003G257100 Sobic004G329300--Sobic003G322700 Sobic004G329300--Sobic007G004500 Sobic001G235500 Sobic001G235500 Sobic006G146100--Sobic001G235500 Sobic006G146100--Sobic001G092000 Sobic009G038501 Sobic009G038501 Sobic006G146100--Sobic009G038501 Sobic001G217400 Sobic001G217400 Sobic006G146100--Sobic001G217400 Sobic005G215766 Sobic005G215766 Sobic006G146100--Sobic005G215766 Sobic006G146100--Sobic003G059300 Sobic008G144500 Sobic008G144500 Sobic006G146100--Sobic008G144500 Sobic009G197700 Sobic009G197700 Sobic006G146100--Sobic009G197700 Sobic003G360900 Sobic003G360900 Sobic006G146100--Sobic003G360900 Sobic001G459600 Sobic001G459600 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic004G034600 Sobic004G034600 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic009G011600 Sobic009G011600 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic001G462500--Sobic002G266000 Sobic001G462500--Sobic006G204900 Sobic001G462500--Sobic003G322700 Sobic001G462500--Sobic004G265800 Sobic001G462500--Sobic001G016700 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400
Octagon: transcription factors


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