Gene annotation
Transcriptome id Sobic.009G147300.4,Sobic.009G147300.1,Sobic.009G147300.3,Sobic.009G147300.2
Synonym
Functional annotation expressed protein
UniProt C6JSP1 , A0A1Z5R2Q9 , C5YY99 , A0A1Z5R2S0
Pfam -
Panther DB PTHR12606 PTHR12606:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g06830.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
2 Sobic.001G413000 ABC transporter family protein, putative, expressed -
3 Sobic.007G169300 expressed protein -
4 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
5 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
6 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
7 Sobic.002G390500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyruvate dehydrogenase kinase(PubMedID : 27016024)@kinase, putative, expressed K00898: pyruvate dehydrogenase kinase 2/3/4
8 Sobic.006G243800 OsWAK55 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.001G517800 NIN, putative, expressed -
10 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
11 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.007G090403 - -
13 Sobic.003G166200 expressed protein -
14 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
16 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
17 Sobic.007G166200 PPDK(PubMedID : 19549309)@NADP-malete dehydrogenase(PubMedID : 26904072)@NADP-malate dehydrogenase (NADP-MDH)(PubMedID : 16243851)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
18 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
19 Sobic.010G145500 expressed protein -
20 Sobic.010G181100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G147300 Sobic009G147300 Sobic001G086800 Sobic001G086800 Sobic009G147300--Sobic001G086800 Sobic001G413000 Sobic001G413000 Sobic009G147300--Sobic001G413000 Sobic007G169300 Sobic007G169300 Sobic009G147300--Sobic007G169300 Sobic003G080700 Sobic003G080700 Sobic009G147300--Sobic003G080700 Sobic003G190100 Sobic003G190100 Sobic009G147300--Sobic003G190100 Sobic005G149200 Sobic005G149200 Sobic009G147300--Sobic005G149200 Sobic002G390500 Sobic002G390500 Sobic009G147300--Sobic002G390500 Sobic006G243800 Sobic006G243800 Sobic009G147300--Sobic006G243800 Sobic001G517800 Sobic001G517800 Sobic009G147300--Sobic001G517800 Sobic001G086800--Sobic009G147300 Sobic001G086800--Sobic001G413000 Sobic001G086800--Sobic002G390500 Sobic006G259600 Sobic006G259600 Sobic001G086800--Sobic006G259600 Sobic002G136100 Sobic002G136100 Sobic001G086800--Sobic002G136100 Sobic002G072100 Sobic002G072100 Sobic001G086800--Sobic002G072100 Sobic001G086800--Sobic006G243800 Sobic005G179300 Sobic005G179300 Sobic001G086800--Sobic005G179300 Sobic008G060000 Sobic008G060000 Sobic001G086800--Sobic008G060000 Sobic002G173100 Sobic002G173100 Sobic001G413000--Sobic002G173100 Sobic001G413000--Sobic006G259600 Sobic001G243200 Sobic001G243200 Sobic001G413000--Sobic001G243200 Sobic007G090403 Sobic007G090403 Sobic001G413000--Sobic007G090403 Sobic001G413000--Sobic003G080700 Sobic001G413000--Sobic005G179300 Sobic009G082000 Sobic009G082000 Sobic001G413000--Sobic009G082000 Sobic003G160100 Sobic003G160100 Sobic001G413000--Sobic003G160100 Sobic009G219100 Sobic009G219100 Sobic001G413000--Sobic009G219100 Sobic007G227700 Sobic007G227700 Sobic007G169300--Sobic007G227700 Sobic008G081900 Sobic008G081900 Sobic007G169300--Sobic008G081900 Sobic006G030400 Sobic006G030400 Sobic007G169300--Sobic006G030400 Sobic002G193100 Sobic002G193100 Sobic007G169300--Sobic002G193100 Sobic002G129400 Sobic002G129400 Sobic007G169300--Sobic002G129400 Sobic009G011600 Sobic009G011600 Sobic007G169300--Sobic009G011600 Sobic002G349100 Sobic002G349100 Sobic007G169300--Sobic002G349100 Sobic004G026500 Sobic004G026500 Sobic007G169300--Sobic004G026500 Sobic010G058200 Sobic010G058200 Sobic007G169300--Sobic010G058200 Sobic002G017500 Sobic002G017500 Sobic003G080700--Sobic002G017500 Sobic003G080700--Sobic005G179300 Sobic003G080700--Sobic001G413000 Sobic003G080700--Sobic001G243200 Sobic002G244200 Sobic002G244200 Sobic003G080700--Sobic002G244200 Sobic003G080700--Sobic002G390500 Sobic010G131700 Sobic010G131700 Sobic003G080700--Sobic010G131700 Sobic003G080700--Sobic003G190100 Sobic003G416000 Sobic003G416000 Sobic003G080700--Sobic003G416000 Sobic003G190100--Sobic002G173100 Sobic005G093800 Sobic005G093800 Sobic003G190100--Sobic005G093800 Sobic002G077400 Sobic002G077400 Sobic003G190100--Sobic002G077400 Sobic003G190100--Sobic002G244200 Sobic004G271600 Sobic004G271600 Sobic003G190100--Sobic004G271600 Sobic007G185300 Sobic007G185300 Sobic003G190100--Sobic007G185300 Sobic007G133000 Sobic007G133000 Sobic003G190100--Sobic007G133000 Sobic006G177900 Sobic006G177900 Sobic003G190100--Sobic006G177900 Sobic003G190100--Sobic005G179300 Sobic001G375100 Sobic001G375100 Sobic005G149200--Sobic001G375100 Sobic006G219600 Sobic006G219600 Sobic005G149200--Sobic006G219600 Sobic001G454500 Sobic001G454500 Sobic005G149200--Sobic001G454500 Sobic006G133900 Sobic006G133900 Sobic005G149200--Sobic006G133900 Sobic003G301900 Sobic003G301900 Sobic005G149200--Sobic003G301900 Sobic005G149200--Sobic001G517800 Sobic001G333800 Sobic001G333800 Sobic005G149200--Sobic001G333800 Sobic005G149200--Sobic007G090403 Sobic003G155100 Sobic003G155100 Sobic005G149200--Sobic003G155100 Sobic002G412100 Sobic002G412100 Sobic002G390500--Sobic002G412100 Sobic002G390500--Sobic009G219100 Sobic002G390500--Sobic005G179300 Sobic003G343500 Sobic003G343500 Sobic002G390500--Sobic003G343500 Sobic002G390500--Sobic001G333800 Sobic010G181100 Sobic010G181100 Sobic002G390500--Sobic010G181100 Sobic002G390500--Sobic006G259600 Sobic002G390500--Sobic003G080700 Sobic001G003200 Sobic001G003200 Sobic002G390500--Sobic001G003200 Sobic006G243800--Sobic005G179300 Sobic006G212800 Sobic006G212800 Sobic006G243800--Sobic006G212800 Sobic006G243800--Sobic004G271600 Sobic001G470300 Sobic001G470300 Sobic006G243800--Sobic001G470300 Sobic001G180200 Sobic001G180200 Sobic006G243800--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic006G243800--Sobic006G235400 Sobic006G090100 Sobic006G090100 Sobic006G243800--Sobic006G090100 Sobic006G243800--Sobic006G259600 Sobic009G207900 Sobic009G207900 Sobic006G243800--Sobic009G207900 Sobic001G459600 Sobic001G459600 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic004G034600 Sobic004G034600 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic003G322700 Sobic003G322700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300
Octagon: transcription factors


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