Gene annotation
Transcriptome id Sobic.004G236000.1
Synonym LAC14
Functional annotation laccase precursor protein, putative, expressed
UniProt C5XYR2
Pfam PF00394 PF07732 PF07731
Panther DB PTHR11709 PTHR11709:SF118
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G09360 : laccase 14
RAP-DB (Rice) LOC_Os02g51440.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a033185
Brachypodium KQK01912
Barley HORVU5Hr1G115670.1 , HORVU6Hr1G075380.3 , HORVU6Hr1G075380.2 , HORVU6Hr1G075380.1 , HORVU6Hr1G075380.4 , HORVU7Hr1G083090.4 , HORVU7Hr1G083090.1 , HORVU7Hr1G036100.5 , HORVU7Hr1G036100.4 , HORVU7Hr1G036100.7 , HORVU7Hr1G036100.6 , HORVU7Hr1G036100.1 , HORVU7Hr1G036100.3 , HORVU7Hr1G036100.2 , HORVU7Hr1G083090.3 , HORVU7Hr1G083090.2
Wheat TraesCS7B02G248800 , TraesCS7D02G176300 , TraesCS6D02G284100 , TraesCS7B02G079900 , TraesCS7B02G080100 , TraesCS7B02G080100 , TraesCS7A02G337400 , TraesCS6D02G284200 , TraesCS6A02G305000 , TraesCS7D02G176500 , TraesCS7D02G345000 , TraesCS6A02G304900 , TraesCS7A02G175000 , TraesCS7D02G176400 , TraesCS7B02G079800
Populus -


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cDNA sequences
Sobic.004G236000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G038501 - -
2 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
4 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
5 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
6 Sobic.007G125900 protein kinase domain containing protein, expressed -
7 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.008G144500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS12-09 - C2H2 zinc finger protein, expressed -
9 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
10 Sobic.007G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type family protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
11 Sobic.009G135100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
12 Sobic.004G236550 - -
13 Sobic.009G197700 expressed protein -
14 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
15 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.009G200300 expressed protein -
17 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
18 Sobic.005G212700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
20 Sobic.001G085900 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44


Gene co-expression network
sample Sobic004G236000 Sobic004G236000 Sobic009G038501 Sobic009G038501 Sobic004G236000--Sobic009G038501 Sobic004G236600 Sobic004G236600 Sobic004G236000--Sobic004G236600 Sobic001G151800 Sobic001G151800 Sobic004G236000--Sobic001G151800 Sobic003G348400 Sobic003G348400 Sobic004G236000--Sobic003G348400 Sobic009G236200 Sobic009G236200 Sobic004G236000--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic004G236000--Sobic007G125900 Sobic002G355200 Sobic002G355200 Sobic004G236000--Sobic002G355200 Sobic008G144500 Sobic008G144500 Sobic004G236000--Sobic008G144500 Sobic003G232900 Sobic003G232900 Sobic004G236000--Sobic003G232900 Sobic009G038501--Sobic008G144500 Sobic009G038501--Sobic004G236600 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic001G251900 Sobic001G251900 Sobic009G038501--Sobic001G251900 Sobic005G152100 Sobic005G152100 Sobic009G038501--Sobic005G152100 Sobic001G212000 Sobic001G212000 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G038501--Sobic009G236200 Sobic001G488500 Sobic001G488500 Sobic004G236600--Sobic001G488500 Sobic004G236600--Sobic005G152100 Sobic002G322900 Sobic002G322900 Sobic004G236600--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic004G236600--Sobic004G255000 Sobic004G246200 Sobic004G246200 Sobic004G236600--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic004G236600--Sobic001G412700 Sobic008G024400 Sobic008G024400 Sobic004G236600--Sobic008G024400 Sobic005G215900 Sobic005G215900 Sobic004G236600--Sobic005G215900 Sobic004G236600--Sobic009G038501 Sobic001G151800--Sobic009G236200 Sobic001G151800--Sobic002G355200 Sobic001G151800--Sobic007G125900 Sobic001G151800--Sobic003G232900 Sobic001G151800--Sobic003G348400 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic006G140000 Sobic006G140000 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic003G348400--Sobic007G125900 Sobic003G348400--Sobic005G117400 Sobic003G348400--Sobic001G151800 Sobic003G338400 Sobic003G338400 Sobic003G348400--Sobic003G338400 Sobic004G102400 Sobic004G102400 Sobic003G348400--Sobic004G102400 Sobic003G348400--Sobic006G140000 Sobic006G091100 Sobic006G091100 Sobic003G348400--Sobic006G091100 Sobic005G212700 Sobic005G212700 Sobic003G348400--Sobic005G212700 Sobic001G003000 Sobic001G003000 Sobic003G348400--Sobic001G003000 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic009G236200--Sobic005G016800 Sobic002G381300 Sobic002G381300 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G167700 Sobic009G167700 Sobic009G236200--Sobic009G167700 Sobic009G236200--Sobic004G102400 Sobic009G236200--Sobic005G215900 Sobic007G125900--Sobic003G348400 Sobic007G125900--Sobic005G117400 Sobic007G125900--Sobic001G151800 Sobic001G074200 Sobic001G074200 Sobic007G125900--Sobic001G074200 Sobic007G125900--Sobic009G236200 Sobic007G125900--Sobic002G355200 Sobic007G125900--Sobic005G016800 Sobic007G125900--Sobic004G102400 Sobic009G127000 Sobic009G127000 Sobic007G125900--Sobic009G127000 Sobic002G355200--Sobic001G151800 Sobic002G355200--Sobic008G144500 Sobic002G355200--Sobic009G236200 Sobic002G355200--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic002G355200--Sobic004G236550 Sobic002G355200--Sobic005G016800 Sobic009G236300 Sobic009G236300 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic010G182966 Sobic010G182966 Sobic008G144500--Sobic010G182966 Sobic008G144500--Sobic009G038501 Sobic008G144500--Sobic002G355200 Sobic008G144500--Sobic009G236300 Sobic003G000600 Sobic003G000600 Sobic008G144500--Sobic003G000600 Sobic009G142200 Sobic009G142200 Sobic008G144500--Sobic009G142200 Sobic006G086100 Sobic006G086100 Sobic008G144500--Sobic006G086100 Sobic003G348700 Sobic003G348700 Sobic008G144500--Sobic003G348700 Sobic005G215766 Sobic005G215766 Sobic008G144500--Sobic005G215766 Sobic003G232900--Sobic001G151800 Sobic003G232900--Sobic005G117400 Sobic003G232900--Sobic002G355200 Sobic003G232900--Sobic007G125900 Sobic003G232900--Sobic009G236200 Sobic003G232900--Sobic004G236600 Sobic003G232900--Sobic004G102400 Sobic003G232900--Sobic002G381300 Sobic004G304400 Sobic004G304400 Sobic003G232900--Sobic004G304400
Octagon: transcription factors


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