Gene annotation
Transcriptome id Sobic.009G200300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P9E4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g54460.1 : expressed protein
MaizeGDB (Corn) Zm00025a037956 , Zm00025a044245
Brachypodium PNT70914
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
3 Sobic.009G135100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
4 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
5 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
6 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
7 Sobic.004G236550 - -
8 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
9 Sobic.007G025800 amino acid transporter, putative, expressed -
10 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
11 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.003G332000 expressed protein -
14 Sobic.006G002600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
15 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
16 Sobic.006G149600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
17 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
18 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
19 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
20 Sobic.001G273500 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -


Gene co-expression network
sample Sobic009G200300 Sobic009G200300 Sobic004G236600 Sobic004G236600 Sobic009G200300--Sobic004G236600 Sobic009G136100 Sobic009G136100 Sobic009G200300--Sobic009G136100 Sobic009G135100 Sobic009G135100 Sobic009G200300--Sobic009G135100 Sobic003G316300 Sobic003G316300 Sobic009G200300--Sobic003G316300 Sobic005G231900 Sobic005G231900 Sobic009G200300--Sobic005G231900 Sobic002G322900 Sobic002G322900 Sobic009G200300--Sobic002G322900 Sobic004G236550 Sobic004G236550 Sobic009G200300--Sobic004G236550 Sobic009G000200 Sobic009G000200 Sobic009G200300--Sobic009G000200 Sobic007G025800 Sobic007G025800 Sobic009G200300--Sobic007G025800 Sobic001G488500 Sobic001G488500 Sobic004G236600--Sobic001G488500 Sobic005G152100 Sobic005G152100 Sobic004G236600--Sobic005G152100 Sobic004G236600--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic004G236600--Sobic004G255000 Sobic004G246200 Sobic004G246200 Sobic004G236600--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic004G236600--Sobic001G412700 Sobic008G024400 Sobic008G024400 Sobic004G236600--Sobic008G024400 Sobic005G215900 Sobic005G215900 Sobic004G236600--Sobic005G215900 Sobic009G038501 Sobic009G038501 Sobic004G236600--Sobic009G038501 Sobic001G235500 Sobic001G235500 Sobic009G136100--Sobic001G235500 Sobic009G118600 Sobic009G118600 Sobic009G136100--Sobic009G118600 Sobic009G136100--Sobic004G236550 Sobic009G079300 Sobic009G079300 Sobic009G136100--Sobic009G079300 Sobic003G252400 Sobic003G252400 Sobic009G136100--Sobic003G252400 Sobic009G136100--Sobic009G200300 Sobic001G005700 Sobic001G005700 Sobic009G136100--Sobic001G005700 Sobic004G211301 Sobic004G211301 Sobic009G136100--Sobic004G211301 Sobic006G115300 Sobic006G115300 Sobic009G136100--Sobic006G115300 Sobic001G103200 Sobic001G103200 Sobic009G135100--Sobic001G103200 Sobic007G125900 Sobic007G125900 Sobic009G135100--Sobic007G125900 Sobic009G135100--Sobic004G236550 Sobic005G035300 Sobic005G035300 Sobic009G135100--Sobic005G035300 Sobic010G016400 Sobic010G016400 Sobic009G135100--Sobic010G016400 Sobic001G074200 Sobic001G074200 Sobic009G135100--Sobic001G074200 Sobic009G135100--Sobic009G079300 Sobic009G135100--Sobic009G200300 Sobic001G085900 Sobic001G085900 Sobic009G135100--Sobic001G085900 Sobic003G316300--Sobic009G000200 Sobic001G386400 Sobic001G386400 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic006G119200 Sobic006G119200 Sobic003G316300--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic003G316300--Sobic009G167700 Sobic001G273500 Sobic001G273500 Sobic003G316300--Sobic001G273500 Sobic004G125900 Sobic004G125900 Sobic003G316300--Sobic004G125900 Sobic001G298500 Sobic001G298500 Sobic003G316300--Sobic001G298500 Sobic003G316300--Sobic009G200300 Sobic004G162400 Sobic004G162400 Sobic005G231900--Sobic004G162400 Sobic005G231900--Sobic001G488500 Sobic005G079900 Sobic005G079900 Sobic005G231900--Sobic005G079900 Sobic004G101900 Sobic004G101900 Sobic005G231900--Sobic004G101900 Sobic005G216000 Sobic005G216000 Sobic005G231900--Sobic005G216000 Sobic005G231900--Sobic004G236600 Sobic002G304000 Sobic002G304000 Sobic005G231900--Sobic002G304000 Sobic005G231900--Sobic002G322900 Sobic006G271200 Sobic006G271200 Sobic005G231900--Sobic006G271200 Sobic002G322900--Sobic004G236600 Sobic002G322900--Sobic005G152100 Sobic002G322900--Sobic004G246200 Sobic001G512800 Sobic001G512800 Sobic002G322900--Sobic001G512800 Sobic002G322900--Sobic001G412700 Sobic004G341200 Sobic004G341200 Sobic002G322900--Sobic004G341200 Sobic002G322900--Sobic004G255000 Sobic002G322900--Sobic001G488500 Sobic010G206000 Sobic010G206000 Sobic002G322900--Sobic010G206000 Sobic004G236550--Sobic009G079300 Sobic002G355200 Sobic002G355200 Sobic004G236550--Sobic002G355200 Sobic004G236550--Sobic009G136100 Sobic003G332000 Sobic003G332000 Sobic004G236550--Sobic003G332000 Sobic006G086100 Sobic006G086100 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic004G236550--Sobic009G118600 Sobic004G236550--Sobic006G115300 Sobic002G225300 Sobic002G225300 Sobic004G236550--Sobic002G225300 Sobic009G000200--Sobic009G079300 Sobic009G000200--Sobic003G316300 Sobic009G000200--Sobic001G386400 Sobic009G000200--Sobic001G298500 Sobic006G002600 Sobic006G002600 Sobic009G000200--Sobic006G002600 Sobic008G189200 Sobic008G189200 Sobic009G000200--Sobic008G189200 Sobic009G000200--Sobic004G125900 Sobic001G180900 Sobic001G180900 Sobic009G000200--Sobic001G180900 Sobic006G149600 Sobic006G149600 Sobic009G000200--Sobic006G149600 Sobic010G260300 Sobic010G260300 Sobic007G025800--Sobic010G260300 Sobic002G271100 Sobic002G271100 Sobic007G025800--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic007G025800--Sobic003G225900 Sobic007G025800--Sobic009G079300 Sobic002G189000 Sobic002G189000 Sobic007G025800--Sobic002G189000 Sobic007G131700 Sobic007G131700 Sobic007G025800--Sobic007G131700 Sobic006G267900 Sobic006G267900 Sobic007G025800--Sobic006G267900 Sobic007G025800--Sobic004G236550 Sobic003G229000 Sobic003G229000 Sobic007G025800--Sobic003G229000
Octagon: transcription factors


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