Gene annotation
Transcriptome id Sobic.002G381300.1
Synonym Sb02g039780
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
VQ domain containing protein, putative, expressed
UniProt A0A1W0W7H1
Pfam PF05678
Panther DB PTHR33179 PTHR33179:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39720 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os07g43140.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031020 , Zm00025a019105 , Zm00025a013820 , Zm00025a048807 , Zm00025a046724
Brachypodium KQJ93567 , KQJ90035 , KQJ98225 , KQK21459
Barley HORVU5Hr1G058170.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
2 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
3 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -
4 Sobic.009G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.006G096400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.009G172500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
7 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
8 Sobic.001G156300 POEI27 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
9 Sobic.004G185900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
10 Sobic.001G360600 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
11 Sobic.003G232900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
12 Sobic.010G224200 MYB family transcription factor, putative, expressed -
13 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
14 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
15 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
16 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
19 Sobic.008G024400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@thaumatin-like protein 1 precursor, putative, expressed -
20 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -


Gene co-expression network
sample Sobic002G381300 Sobic002G381300 Sobic005G215900 Sobic005G215900 Sobic002G381300--Sobic005G215900 Sobic005G016800 Sobic005G016800 Sobic002G381300--Sobic005G016800 Sobic009G236200 Sobic009G236200 Sobic002G381300--Sobic009G236200 Sobic009G016800 Sobic009G016800 Sobic002G381300--Sobic009G016800 Sobic006G096400 Sobic006G096400 Sobic002G381300--Sobic006G096400 Sobic009G172500 Sobic009G172500 Sobic002G381300--Sobic009G172500 Sobic001G151800 Sobic001G151800 Sobic002G381300--Sobic001G151800 Sobic001G156300 Sobic001G156300 Sobic002G381300--Sobic001G156300 Sobic004G185900 Sobic004G185900 Sobic002G381300--Sobic004G185900 Sobic005G152100 Sobic005G152100 Sobic005G215900--Sobic005G152100 Sobic004G236600 Sobic004G236600 Sobic005G215900--Sobic004G236600 Sobic005G215900--Sobic002G381300 Sobic005G216000 Sobic005G216000 Sobic005G215900--Sobic005G216000 Sobic001G488500 Sobic001G488500 Sobic005G215900--Sobic001G488500 Sobic008G024400 Sobic008G024400 Sobic005G215900--Sobic008G024400 Sobic002G304000 Sobic002G304000 Sobic005G215900--Sobic002G304000 Sobic003G149200 Sobic003G149200 Sobic005G215900--Sobic003G149200 Sobic001G249300 Sobic001G249300 Sobic005G215900--Sobic001G249300 Sobic005G016800--Sobic002G381300 Sobic005G016800--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic005G016800--Sobic007G125900 Sobic005G016800--Sobic001G156300 Sobic002G355200 Sobic002G355200 Sobic005G016800--Sobic002G355200 Sobic004G236550 Sobic004G236550 Sobic005G016800--Sobic004G236550 Sobic009G079300 Sobic009G079300 Sobic005G016800--Sobic009G079300 Sobic005G231900 Sobic005G231900 Sobic005G016800--Sobic005G231900 Sobic005G016800--Sobic001G151800 Sobic009G236200--Sobic001G151800 Sobic009G236200--Sobic007G125900 Sobic009G236200--Sobic002G355200 Sobic009G236200--Sobic005G016800 Sobic009G236200--Sobic002G381300 Sobic009G236200--Sobic004G236600 Sobic009G167700 Sobic009G167700 Sobic009G236200--Sobic009G167700 Sobic004G102400 Sobic004G102400 Sobic009G236200--Sobic004G102400 Sobic009G236200--Sobic005G215900 Sobic009G016800--Sobic009G236200 Sobic009G016800--Sobic005G215900 Sobic009G016800--Sobic002G381300 Sobic010G016400 Sobic010G016400 Sobic009G016800--Sobic010G016400 Sobic002G249000 Sobic002G249000 Sobic009G016800--Sobic002G249000 Sobic003G085300 Sobic003G085300 Sobic009G016800--Sobic003G085300 Sobic006G140000 Sobic006G140000 Sobic009G016800--Sobic006G140000 Sobic003G061400 Sobic003G061400 Sobic009G016800--Sobic003G061400 Sobic009G016800--Sobic001G151800 Sobic006G096400--Sobic009G172500 Sobic006G096400--Sobic010G016400 Sobic008G179500 Sobic008G179500 Sobic006G096400--Sobic008G179500 Sobic001G026900 Sobic001G026900 Sobic006G096400--Sobic001G026900 Sobic001G010400 Sobic001G010400 Sobic006G096400--Sobic001G010400 Sobic006G096400--Sobic002G381300 Sobic002G024100 Sobic002G024100 Sobic006G096400--Sobic002G024100 Sobic009G111600 Sobic009G111600 Sobic006G096400--Sobic009G111600 Sobic003G229200 Sobic003G229200 Sobic006G096400--Sobic003G229200 Sobic009G172500--Sobic006G096400 Sobic009G172500--Sobic010G016400 Sobic010G206000 Sobic010G206000 Sobic009G172500--Sobic010G206000 Sobic002G322900 Sobic002G322900 Sobic009G172500--Sobic002G322900 Sobic009G172500--Sobic002G381300 Sobic009G172500--Sobic009G016800 Sobic005G139400 Sobic005G139400 Sobic009G172500--Sobic005G139400 Sobic009G172500--Sobic002G024100 Sobic009G161401 Sobic009G161401 Sobic009G172500--Sobic009G161401 Sobic001G151800--Sobic009G236200 Sobic001G151800--Sobic002G355200 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic003G348400 Sobic003G348400 Sobic001G151800--Sobic003G348400 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic001G156300--Sobic005G016800 Sobic001G156300--Sobic002G381300 Sobic001G224700 Sobic001G224700 Sobic001G156300--Sobic001G224700 Sobic003G075500 Sobic003G075500 Sobic001G156300--Sobic003G075500 Sobic004G067200 Sobic004G067200 Sobic001G156300--Sobic004G067200 Sobic002G210800 Sobic002G210800 Sobic001G156300--Sobic002G210800 Sobic001G157200 Sobic001G157200 Sobic001G156300--Sobic001G157200 Sobic002G379866 Sobic002G379866 Sobic001G156300--Sobic002G379866 Sobic010G224200 Sobic010G224200 Sobic001G156300--Sobic010G224200 Sobic004G185900--Sobic001G010400 Sobic007G148800 Sobic007G148800 Sobic004G185900--Sobic007G148800 Sobic004G185900--Sobic006G140000 Sobic004G054300 Sobic004G054300 Sobic004G185900--Sobic004G054300 Sobic004G185900--Sobic010G016400 Sobic004G185900--Sobic002G249000 Sobic002G113800 Sobic002G113800 Sobic004G185900--Sobic002G113800 Sobic004G185900--Sobic005G139400 Sobic010G176700 Sobic010G176700 Sobic004G185900--Sobic010G176700
Octagon: transcription factors


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