Gene annotation
Transcriptome id Sobic.001G360600.1
Synonym Sb01g034440
Functional annotation pyrrolidone-carboxylate peptidase, putative, expressed
UniProt C5WYQ5
Pfam PF01470
Panther DB PTHR23402 PTHR23402:SF17
NCBI CDD KOG4755; Predicted pyroglutamyl peptidase
KEGG Orthology K01304; pyroglutamyl-peptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56700 : Peptidase C15, pyroglutamyl peptidase I-like
RAP-DB (Rice) LOC_Os03g25270.4 : pyrrolidone-carboxylate peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a002617 , Zm00025a052310
Brachypodium KQK14987 , KQK14986
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G360600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G303300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K14454: aspartate aminotransferase, cytoplasmic
2 Sobic.002G381300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
3 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
4 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
5 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G192700 expressed protein -
7 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
8 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
9 Sobic.003G098000 armadillo/beta-catenin repeat family protein, putative, expressed K08332: vacuolar protein 8
10 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
11 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
13 Sobic.006G096400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
15 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
16 Sobic.004G301400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K08331: autophagy-related protein 13
17 Sobic.004G349800 expressed protein -
18 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
19 Sobic.008G179500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
20 Sobic.009G236200 lectin-like receptor kinase 7, putative, expressed -


Gene co-expression network
sample Sobic001G360600 Sobic001G360600 Sobic003G303300 Sobic003G303300 Sobic001G360600--Sobic003G303300 Sobic002G381300 Sobic002G381300 Sobic001G360600--Sobic002G381300 Sobic004G102400 Sobic004G102400 Sobic001G360600--Sobic004G102400 Sobic002G249000 Sobic002G249000 Sobic001G360600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic001G360600--Sobic003G333400 Sobic006G192700 Sobic006G192700 Sobic001G360600--Sobic006G192700 Sobic003G009100 Sobic003G009100 Sobic001G360600--Sobic003G009100 Sobic005G150800 Sobic005G150800 Sobic001G360600--Sobic005G150800 Sobic003G098000 Sobic003G098000 Sobic001G360600--Sobic003G098000 Sobic005G079900 Sobic005G079900 Sobic003G303300--Sobic005G079900 Sobic001G408200 Sobic001G408200 Sobic003G303300--Sobic001G408200 Sobic005G231900 Sobic005G231900 Sobic003G303300--Sobic005G231900 Sobic004G101900 Sobic004G101900 Sobic003G303300--Sobic004G101900 Sobic003G303300--Sobic001G360600 Sobic009G234800 Sobic009G234800 Sobic003G303300--Sobic009G234800 Sobic005G215900 Sobic005G215900 Sobic003G303300--Sobic005G215900 Sobic003G303300--Sobic006G192700 Sobic003G257000 Sobic003G257000 Sobic003G303300--Sobic003G257000 Sobic002G381300--Sobic005G215900 Sobic005G016800 Sobic005G016800 Sobic002G381300--Sobic005G016800 Sobic009G236200 Sobic009G236200 Sobic002G381300--Sobic009G236200 Sobic009G016800 Sobic009G016800 Sobic002G381300--Sobic009G016800 Sobic006G096400 Sobic006G096400 Sobic002G381300--Sobic006G096400 Sobic009G172500 Sobic009G172500 Sobic002G381300--Sobic009G172500 Sobic001G151800 Sobic001G151800 Sobic002G381300--Sobic001G151800 Sobic001G156300 Sobic001G156300 Sobic002G381300--Sobic001G156300 Sobic004G185900 Sobic004G185900 Sobic002G381300--Sobic004G185900 Sobic003G338400 Sobic003G338400 Sobic004G102400--Sobic003G338400 Sobic001G158500 Sobic001G158500 Sobic004G102400--Sobic001G158500 Sobic001G003000 Sobic001G003000 Sobic004G102400--Sobic001G003000 Sobic009G167700 Sobic009G167700 Sobic004G102400--Sobic009G167700 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic004G102400--Sobic001G089800 Sobic001G057800 Sobic001G057800 Sobic004G102400--Sobic001G057800 Sobic004G042300 Sobic004G042300 Sobic004G102400--Sobic004G042300 Sobic004G277000 Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic010G224200 Sobic010G224200 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic010G176700 Sobic010G176700 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic007G195100 Sobic007G195100 Sobic003G333400--Sobic007G195100 Sobic009G146100 Sobic009G146100 Sobic003G333400--Sobic009G146100 Sobic003G333400--Sobic002G180600 Sobic008G179500 Sobic008G179500 Sobic003G333400--Sobic008G179500 Sobic004G276100 Sobic004G276100 Sobic003G333400--Sobic004G276100 Sobic003G333400--Sobic004G277000 Sobic003G333400--Sobic002G249000 Sobic003G333400--Sobic004G050000 Sobic003G253000 Sobic003G253000 Sobic003G333400--Sobic003G253000 Sobic006G192700--Sobic001G057800 Sobic010G064600 Sobic010G064600 Sobic006G192700--Sobic010G064600 Sobic008G093000 Sobic008G093000 Sobic006G192700--Sobic008G093000 Sobic004G006200 Sobic004G006200 Sobic006G192700--Sobic004G006200 Sobic006G192700--Sobic001G003000 Sobic009G207000 Sobic009G207000 Sobic006G192700--Sobic009G207000 Sobic006G192700--Sobic003G009100 Sobic005G139400 Sobic005G139400 Sobic006G192700--Sobic005G139400 Sobic002G244100 Sobic002G244100 Sobic006G192700--Sobic002G244100 Sobic001G023200 Sobic001G023200 Sobic003G009100--Sobic001G023200 Sobic003G354400 Sobic003G354400 Sobic003G009100--Sobic003G354400 Sobic003G009100--Sobic005G150800 Sobic002G113300 Sobic002G113300 Sobic003G009100--Sobic002G113300 Sobic002G132000 Sobic002G132000 Sobic003G009100--Sobic002G132000 Sobic003G009100--Sobic004G006200 Sobic009G054700 Sobic009G054700 Sobic003G009100--Sobic009G054700 Sobic004G203100 Sobic004G203100 Sobic003G009100--Sobic004G203100 Sobic003G009100--Sobic006G192700 Sobic005G150800--Sobic004G102400 Sobic001G393800 Sobic001G393800 Sobic005G150800--Sobic001G393800 Sobic008G107500 Sobic008G107500 Sobic005G150800--Sobic008G107500 Sobic005G150800--Sobic003G009100 Sobic005G150800--Sobic009G167700 Sobic005G150800--Sobic001G057800 Sobic005G150800--Sobic003G354400 Sobic006G114800 Sobic006G114800 Sobic005G150800--Sobic006G114800 Sobic004G167400 Sobic004G167400 Sobic005G150800--Sobic004G167400 Sobic002G375300 Sobic002G375300 Sobic003G098000--Sobic002G375300 Sobic003G098000--Sobic004G102400 Sobic003G228100 Sobic003G228100 Sobic003G098000--Sobic003G228100 Sobic003G098000--Sobic004G042300 Sobic003G246700 Sobic003G246700 Sobic003G098000--Sobic003G246700 Sobic004G337200 Sobic004G337200 Sobic003G098000--Sobic004G337200 Sobic002G217400 Sobic002G217400 Sobic003G098000--Sobic002G217400 Sobic005G203800 Sobic005G203800 Sobic003G098000--Sobic005G203800 Sobic003G098000--Sobic001G057800
Octagon: transcription factors


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