Gene annotation
Transcriptome id Sobic.006G192700.1
Synonym Sb06g026550
Functional annotation expressed protein
UniProt C5YEK9
Pfam PF00071 PF10199
Panther DB PTHR14659 PTHR14659:SF1
NCBI CDD KOG4273; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT5G65960 : GTP binding
RAP-DB (Rice) LOC_Os04g49530.1 : expressed protein
MaizeGDB (Corn) Zm00025a039470 , Zm00025a027777 , Zm00025a010057
Brachypodium KQJ84220
Barley -
Wheat TraesCS2A02G455900 , TraesCS2B02G477900 , TraesCS2D02G456200
Populus -


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cDNA sequences
Sobic.006G192700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
2 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
3 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
4 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
5 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
6 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
7 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
8 Sobic.005G139400 SNARE associated Golgi protein, putative, expressed -
9 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
11 Sobic.003G087000 expressed protein -
12 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
13 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
14 Sobic.004G167400 expressed protein -
15 Sobic.005G058900 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G334600 OsFBX95 - F-box domain containing protein, expressed -
17 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
18 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
19 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
20 Sobic.003G257000 THAP domain-containing protein 4, putative, expressed -


Gene co-expression network
sample Sobic006G192700 Sobic006G192700 Sobic001G057800 Sobic001G057800 Sobic006G192700--Sobic001G057800 Sobic010G064600 Sobic010G064600 Sobic006G192700--Sobic010G064600 Sobic008G093000 Sobic008G093000 Sobic006G192700--Sobic008G093000 Sobic004G006200 Sobic004G006200 Sobic006G192700--Sobic004G006200 Sobic001G003000 Sobic001G003000 Sobic006G192700--Sobic001G003000 Sobic009G207000 Sobic009G207000 Sobic006G192700--Sobic009G207000 Sobic003G009100 Sobic003G009100 Sobic006G192700--Sobic003G009100 Sobic005G139400 Sobic005G139400 Sobic006G192700--Sobic005G139400 Sobic002G244100 Sobic002G244100 Sobic006G192700--Sobic002G244100 Sobic001G323000 Sobic001G323000 Sobic001G057800--Sobic001G323000 Sobic002G400000 Sobic002G400000 Sobic001G057800--Sobic002G400000 Sobic002G352700 Sobic002G352700 Sobic001G057800--Sobic002G352700 Sobic002G385900 Sobic002G385900 Sobic001G057800--Sobic002G385900 Sobic001G158500 Sobic001G158500 Sobic001G057800--Sobic001G158500 Sobic004G130900 Sobic004G130900 Sobic001G057800--Sobic004G130900 Sobic010G000900 Sobic010G000900 Sobic001G057800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic001G057800--Sobic010G168600 Sobic001G057800--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic010G064600--Sobic004G228800 Sobic010G184300 Sobic010G184300 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic010G064600--Sobic001G003000 Sobic001G199100 Sobic001G199100 Sobic008G093000--Sobic001G199100 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic008G093000--Sobic009G207000 Sobic008G093000--Sobic003G087000 Sobic008G093000--Sobic002G244100 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic006G271200 Sobic006G271200 Sobic001G003000--Sobic006G271200 Sobic001G003000--Sobic001G089800 Sobic009G126900 Sobic009G126900 Sobic001G003000--Sobic009G126900 Sobic004G102400 Sobic004G102400 Sobic001G003000--Sobic004G102400 Sobic006G237900 Sobic006G237900 Sobic001G003000--Sobic006G237900 Sobic003G005600 Sobic003G005600 Sobic001G003000--Sobic003G005600 Sobic010G043400 Sobic010G043400 Sobic001G003000--Sobic010G043400 Sobic009G193700 Sobic009G193700 Sobic001G003000--Sobic009G193700 Sobic001G350700 Sobic001G350700 Sobic001G003000--Sobic001G350700 Sobic009G228700 Sobic009G228700 Sobic009G207000--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G207000--Sobic004G066200 Sobic009G207000--Sobic001G199100 Sobic009G207000--Sobic001G323000 Sobic001G085100 Sobic001G085100 Sobic009G207000--Sobic001G085100 Sobic006G249700 Sobic006G249700 Sobic009G207000--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G207000--Sobic006G148200 Sobic009G207000--Sobic010G000900 Sobic009G207000--Sobic003G012200 Sobic001G023200 Sobic001G023200 Sobic003G009100--Sobic001G023200 Sobic003G354400 Sobic003G354400 Sobic003G009100--Sobic003G354400 Sobic005G150800 Sobic005G150800 Sobic003G009100--Sobic005G150800 Sobic002G113300 Sobic002G113300 Sobic003G009100--Sobic002G113300 Sobic003G009100--Sobic002G132000 Sobic003G009100--Sobic004G006200 Sobic009G054700 Sobic009G054700 Sobic003G009100--Sobic009G054700 Sobic004G203100 Sobic004G203100 Sobic003G009100--Sobic004G203100 Sobic003G009100--Sobic006G192700 Sobic010G016400 Sobic010G016400 Sobic005G139400--Sobic010G016400 Sobic004G347300 Sobic004G347300 Sobic005G139400--Sobic004G347300 Sobic006G232000 Sobic006G232000 Sobic005G139400--Sobic006G232000 Sobic001G010400 Sobic001G010400 Sobic005G139400--Sobic001G010400 Sobic005G139400--Sobic006G192700 Sobic002G113800 Sobic002G113800 Sobic005G139400--Sobic002G113800 Sobic001G132000 Sobic001G132000 Sobic005G139400--Sobic001G132000 Sobic007G148800 Sobic007G148800 Sobic005G139400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic005G139400--Sobic004G185900 Sobic009G167700 Sobic009G167700 Sobic002G244100--Sobic009G167700 Sobic002G244100--Sobic001G089800 Sobic002G244100--Sobic008G093000 Sobic004G225100 Sobic004G225100 Sobic002G244100--Sobic004G225100 Sobic002G244100--Sobic003G354400 Sobic002G244100--Sobic010G064600 Sobic004G167400 Sobic004G167400 Sobic002G244100--Sobic004G167400 Sobic001G334600 Sobic001G334600 Sobic002G244100--Sobic001G334600 Sobic002G244100--Sobic009G126900
Octagon: transcription factors


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