Gene annotation
Transcriptome id Sobic.001G334600.1
Synonym Sb01g032310
Functional annotation OsFBX95 - F-box domain containing protein, expressed
UniProt C5WWI6
Pfam PF12937
Panther DB PTHR20995 PTHR20995:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G39250 : F-box family protein
RAP-DB (Rice) LOC_Os03g30920.1 : OsFBX95 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002888
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G334600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
2 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
3 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
4 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
5 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
7 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
9 Sobic.010G264700 - -
10 Sobic.009G193700 transmembrane protein 56, putative, expressed -
11 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
12 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
13 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
14 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
15 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
17 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
18 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
19 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
20 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase


Gene co-expression network
sample Sobic001G334600 Sobic001G334600 Sobic009G057300 Sobic009G057300 Sobic001G334600--Sobic009G057300 Sobic003G354400 Sobic003G354400 Sobic001G334600--Sobic003G354400 Sobic004G101900 Sobic004G101900 Sobic001G334600--Sobic004G101900 Sobic003G061800 Sobic003G061800 Sobic001G334600--Sobic003G061800 Sobic001G111150 Sobic001G111150 Sobic001G334600--Sobic001G111150 Sobic004G225100 Sobic004G225100 Sobic001G334600--Sobic004G225100 Sobic006G199000 Sobic006G199000 Sobic001G334600--Sobic006G199000 Sobic001G015500 Sobic001G015500 Sobic001G334600--Sobic001G015500 Sobic010G264700 Sobic010G264700 Sobic001G334600--Sobic010G264700 Sobic009G057300--Sobic003G061800 Sobic001G474500 Sobic001G474500 Sobic009G057300--Sobic001G474500 Sobic007G068100 Sobic007G068100 Sobic009G057300--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic009G057300--Sobic001G325200 Sobic003G388251 Sobic003G388251 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic009G057300--Sobic003G354400 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700 Sobic003G354400--Sobic003G061800 Sobic003G354400--Sobic003G329400 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic004G101900--Sobic002G304000 Sobic002G215700 Sobic002G215700 Sobic004G101900--Sobic002G215700 Sobic004G101900--Sobic001G325200 Sobic009G226300 Sobic009G226300 Sobic004G101900--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic004G101900--Sobic009G054500 Sobic008G062200 Sobic008G062200 Sobic004G101900--Sobic008G062200 Sobic003G148800 Sobic003G148800 Sobic004G101900--Sobic003G148800 Sobic004G124200 Sobic004G124200 Sobic004G101900--Sobic004G124200 Sobic004G101900--Sobic001G015500 Sobic003G061800--Sobic009G057300 Sobic004G345800 Sobic004G345800 Sobic003G061800--Sobic004G345800 Sobic003G061800--Sobic003G354400 Sobic003G061800--Sobic001G474500 Sobic003G061800--Sobic009G126900 Sobic003G061800--Sobic003G388251 Sobic003G061800--Sobic007G068100 Sobic003G061800--Sobic003G329400 Sobic003G061800--Sobic004G101900 Sobic001G111150--Sobic010G130200 Sobic001G111150--Sobic007G068100 Sobic001G111150--Sobic009G057300 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic001G111150--Sobic003G388251 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic001G111150--Sobic004G124200 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic002G244100 Sobic002G244100 Sobic004G225100--Sobic002G244100 Sobic004G225100--Sobic001G334600 Sobic009G167700 Sobic009G167700 Sobic004G225100--Sobic009G167700 Sobic004G225100--Sobic003G388251 Sobic005G178100 Sobic005G178100 Sobic004G225100--Sobic005G178100 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic008G153400 Sobic008G153400 Sobic006G199000--Sobic008G153400 Sobic003G398100 Sobic003G398100 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic003G355600 Sobic003G355600 Sobic006G199000--Sobic003G355600 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic006G199000--Sobic001G015500 Sobic001G282600 Sobic001G282600 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic001G069900 Sobic001G069900 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic001G015500--Sobic003G087200 Sobic001G015500--Sobic004G101900 Sobic001G015500--Sobic005G178100 Sobic001G015500--Sobic004G124200 Sobic001G015500--Sobic001G150600 Sobic007G186200 Sobic007G186200 Sobic001G015500--Sobic007G186200 Sobic004G006200 Sobic004G006200 Sobic010G264700--Sobic004G006200 Sobic010G264700--Sobic001G334600 Sobic004G295800 Sobic004G295800 Sobic010G264700--Sobic004G295800 Sobic002G132000 Sobic002G132000 Sobic010G264700--Sobic002G132000 Sobic010G264700--Sobic009G057300 Sobic007G062600 Sobic007G062600 Sobic010G264700--Sobic007G062600 Sobic001G137100 Sobic001G137100 Sobic010G264700--Sobic001G137100 Sobic010G264700--Sobic002G244100 Sobic008G191100 Sobic008G191100 Sobic010G264700--Sobic008G191100
Octagon: transcription factors


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