Gene annotation
Transcriptome id Sobic.004G349800.2,Sobic.004G349800.1
Synonym Sb04g037650
Functional annotation expressed protein
UniProt A0A1Z5RQW2 , A0A194YU65
Pfam -
Panther DB PTHR34797 PTHR34797:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45980 : -
RAP-DB (Rice) LOC_Os02g57600.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G349800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
3 Sobic.003G146900 lipase class 3 family protein, putative, expressed -
4 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
5 Sobic.001G124300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.009G171700 SAG20, putative, expressed -
8 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
9 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
10 Sobic.010G067700 expressed protein -
11 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
12 Sobic.008G180900 YIF1B, putative, expressed -
13 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
14 Sobic.009G256200 expressed protein -
15 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
16 Sobic.005G036400 RING-H2 finger protein, putative, expressed -
17 Sobic.002G421400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.001G078500 expressed protein -
19 Sobic.006G115466 - -
20 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G


Gene co-expression network
sample Sobic004G349800 Sobic004G349800 Sobic004G320000 Sobic004G320000 Sobic004G349800--Sobic004G320000 Sobic004G203100 Sobic004G203100 Sobic004G349800--Sobic004G203100 Sobic003G146900 Sobic003G146900 Sobic004G349800--Sobic003G146900 Sobic010G168600 Sobic010G168600 Sobic004G349800--Sobic010G168600 Sobic001G124300 Sobic001G124300 Sobic004G349800--Sobic001G124300 Sobic002G256300 Sobic002G256300 Sobic004G349800--Sobic002G256300 Sobic009G171700 Sobic009G171700 Sobic004G349800--Sobic009G171700 Sobic001G512900 Sobic001G512900 Sobic004G349800--Sobic001G512900 Sobic002G352700 Sobic002G352700 Sobic004G349800--Sobic002G352700 Sobic008G174300 Sobic008G174300 Sobic004G320000--Sobic008G174300 Sobic004G320000--Sobic004G349800 Sobic004G320000--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic004G320000--Sobic001G478300 Sobic010G260500 Sobic010G260500 Sobic004G320000--Sobic010G260500 Sobic004G320000--Sobic001G124300 Sobic009G027000 Sobic009G027000 Sobic004G320000--Sobic009G027000 Sobic004G320000--Sobic004G203100 Sobic003G333600 Sobic003G333600 Sobic004G320000--Sobic003G333600 Sobic004G203100--Sobic010G168600 Sobic003G007500 Sobic003G007500 Sobic004G203100--Sobic003G007500 Sobic004G203100--Sobic002G352700 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic010G238700 Sobic010G238700 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic010G083700 Sobic010G083700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic010G067700 Sobic010G067700 Sobic003G146900--Sobic010G067700 Sobic003G355000 Sobic003G355000 Sobic003G146900--Sobic003G355000 Sobic009G216000 Sobic009G216000 Sobic003G146900--Sobic009G216000 Sobic002G314900 Sobic002G314900 Sobic003G146900--Sobic002G314900 Sobic003G146900--Sobic004G349800 Sobic010G095700 Sobic010G095700 Sobic003G146900--Sobic010G095700 Sobic008G128600 Sobic008G128600 Sobic003G146900--Sobic008G128600 Sobic006G261100 Sobic006G261100 Sobic003G146900--Sobic006G261100 Sobic001G473600 Sobic001G473600 Sobic003G146900--Sobic001G473600 Sobic010G168600--Sobic010G083700 Sobic001G078500 Sobic001G078500 Sobic010G168600--Sobic001G078500 Sobic009G246950 Sobic009G246950 Sobic010G168600--Sobic009G246950 Sobic010G168600--Sobic002G352700 Sobic006G263900 Sobic006G263900 Sobic010G168600--Sobic006G263900 Sobic010G168600--Sobic003G007500 Sobic010G168600--Sobic009G171700 Sobic010G168600--Sobic002G256300 Sobic004G104900 Sobic004G104900 Sobic010G168600--Sobic004G104900 Sobic001G124300--Sobic009G054700 Sobic001G124300--Sobic004G320000 Sobic001G124300--Sobic010G168600 Sobic001G124300--Sobic010G067700 Sobic009G172400 Sobic009G172400 Sobic001G124300--Sobic009G172400 Sobic001G124300--Sobic004G349800 Sobic010G264200 Sobic010G264200 Sobic001G124300--Sobic010G264200 Sobic004G094300 Sobic004G094300 Sobic001G124300--Sobic004G094300 Sobic004G034400 Sobic004G034400 Sobic001G124300--Sobic004G034400 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic010G193800 Sobic010G193800 Sobic002G256300--Sobic010G193800 Sobic001G439600 Sobic001G439600 Sobic002G256300--Sobic001G439600 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700 Sobic009G171700--Sobic001G078500 Sobic009G171700--Sobic010G168600 Sobic009G171700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic009G171700--Sobic004G293700 Sobic009G171700--Sobic010G083700 Sobic010G253800 Sobic010G253800 Sobic009G171700--Sobic010G253800 Sobic009G171700--Sobic008G180900 Sobic007G186300 Sobic007G186300 Sobic009G171700--Sobic007G186300 Sobic009G171700--Sobic002G256300 Sobic010G071200 Sobic010G071200 Sobic001G512900--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G512900--Sobic010G055500 Sobic008G142700 Sobic008G142700 Sobic001G512900--Sobic008G142700 Sobic001G512900--Sobic008G174300 Sobic001G083600 Sobic001G083600 Sobic001G512900--Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic001G512900--Sobic001G390500 Sobic001G149700 Sobic001G149700 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic001G512900--Sobic009G246950 Sobic002G352700--Sobic010G168600 Sobic002G352700--Sobic010G253800 Sobic001G057800 Sobic001G057800 Sobic002G352700--Sobic001G057800 Sobic002G352700--Sobic002G256300 Sobic002G352700--Sobic003G007500 Sobic002G352700--Sobic004G203100 Sobic002G352700--Sobic010G083700 Sobic002G352700--Sobic009G246950 Sobic002G352700--Sobic008G180900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.