Gene annotation
Transcriptome id Sobic.009G256200.1
Synonym Sb09g030630
Functional annotation expressed protein
UniProt C5YX07
Pfam -
Panther DB PTHR34364 PTHR34364:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55160 : -
RAP-DB (Rice) LOC_Os05g51540.1 : expressed protein
MaizeGDB (Corn) Zm00025a036776 , Zm00025a044740
Brachypodium KQK08424
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G256200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G221400 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
2 Sobic.009G171700 SAG20, putative, expressed -
3 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.010G101200 B12D protein, putative, expressed -
5 Sobic.003G316850 - -
6 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
8 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
9 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
10 Sobic.004G349800 expressed protein -
11 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta
12 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
13 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
15 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
16 Sobic.008G180900 YIF1B, putative, expressed -
17 Sobic.006G225300 expressed protein -
18 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
19 Sobic.003G416600 mitochondrial carrier protein, putative, expressed K15108: SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
20 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13


Gene co-expression network
sample Sobic009G256200 Sobic009G256200 Sobic010G221400 Sobic010G221400 Sobic009G256200--Sobic010G221400 Sobic009G171700 Sobic009G171700 Sobic009G256200--Sobic009G171700 Sobic010G193800 Sobic010G193800 Sobic009G256200--Sobic010G193800 Sobic010G101200 Sobic010G101200 Sobic009G256200--Sobic010G101200 Sobic003G316850 Sobic003G316850 Sobic009G256200--Sobic003G316850 Sobic002G256300 Sobic002G256300 Sobic009G256200--Sobic002G256300 Sobic009G246950 Sobic009G246950 Sobic009G256200--Sobic009G246950 Sobic004G203100 Sobic004G203100 Sobic009G256200--Sobic004G203100 Sobic002G352700 Sobic002G352700 Sobic009G256200--Sobic002G352700 Sobic010G221400--Sobic009G256200 Sobic010G221400--Sobic010G193800 Sobic010G221400--Sobic002G256300 Sobic008G161800 Sobic008G161800 Sobic010G221400--Sobic008G161800 Sobic002G373800 Sobic002G373800 Sobic010G221400--Sobic002G373800 Sobic010G221400--Sobic003G316850 Sobic010G221400--Sobic009G246950 Sobic001G415500 Sobic001G415500 Sobic010G221400--Sobic001G415500 Sobic009G036900 Sobic009G036900 Sobic010G221400--Sobic009G036900 Sobic001G078500 Sobic001G078500 Sobic009G171700--Sobic001G078500 Sobic010G168600 Sobic010G168600 Sobic009G171700--Sobic010G168600 Sobic009G171700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic009G171700--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic009G171700--Sobic010G083700 Sobic010G253800 Sobic010G253800 Sobic009G171700--Sobic010G253800 Sobic008G180900 Sobic008G180900 Sobic009G171700--Sobic008G180900 Sobic007G186300 Sobic007G186300 Sobic009G171700--Sobic007G186300 Sobic009G171700--Sobic002G256300 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic010G173100 Sobic010G173100 Sobic010G101200--Sobic010G173100 Sobic002G068300 Sobic002G068300 Sobic010G101200--Sobic002G068300 Sobic009G016201 Sobic009G016201 Sobic010G101200--Sobic009G016201 Sobic001G022900 Sobic001G022900 Sobic010G101200--Sobic001G022900 Sobic002G263800 Sobic002G263800 Sobic010G101200--Sobic002G263800 Sobic010G101200--Sobic009G256200 Sobic010G101200--Sobic008G161800 Sobic010G101200--Sobic009G036900 Sobic010G237000 Sobic010G237000 Sobic010G101200--Sobic010G237000 Sobic004G316900 Sobic004G316900 Sobic003G316850--Sobic004G316900 Sobic001G501200 Sobic001G501200 Sobic003G316850--Sobic001G501200 Sobic004G339200 Sobic004G339200 Sobic003G316850--Sobic004G339200 Sobic003G316850--Sobic010G193800 Sobic002G204000 Sobic002G204000 Sobic003G316850--Sobic002G204000 Sobic003G316850--Sobic009G256200 Sobic010G051500 Sobic010G051500 Sobic003G316850--Sobic010G051500 Sobic003G316850--Sobic010G221400 Sobic003G043400 Sobic003G043400 Sobic003G316850--Sobic003G043400 Sobic002G256300--Sobic009G246950 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700 Sobic009G246950--Sobic002G256300 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic009G246950--Sobic008G180900 Sobic001G007200 Sobic001G007200 Sobic009G246950--Sobic001G007200 Sobic004G203100--Sobic010G168600 Sobic003G007500 Sobic003G007500 Sobic004G203100--Sobic003G007500 Sobic004G203100--Sobic002G352700 Sobic001G478300 Sobic001G478300 Sobic004G203100--Sobic001G478300 Sobic004G203100--Sobic008G180900 Sobic010G238700 Sobic010G238700 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic002G352700--Sobic010G168600 Sobic002G352700--Sobic010G253800 Sobic001G057800 Sobic001G057800 Sobic002G352700--Sobic001G057800 Sobic002G352700--Sobic002G256300 Sobic002G352700--Sobic003G007500 Sobic002G352700--Sobic004G203100 Sobic002G352700--Sobic010G083700 Sobic002G352700--Sobic009G246950 Sobic002G352700--Sobic008G180900
Octagon: transcription factors


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