Gene annotation
Transcriptome id Sobic.010G221400.1
Synonym ATHAP5B, HAP5B, SbNF-YC15, Nuclear Factor Y, Sb10g026680, NF-YC2
Functional annotation tentative name (PubMedID : 31536532)
core histone H2A/H2B/H3/H4, putative, expressed
UniProt C5Z7N4
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF37
NCBI CDD KOG1657; CCAAT-binding factor, subunit C (HAP5)
KEGG Orthology K08066; NFYC, nuclear transcription factor Y, gamma
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56170 : nuclear factor Y, subunit C2
RAP-DB (Rice) LOC_Os06g45640.1 : core histone H2A/H2B/H3/H4, putative, expressed
MaizeGDB (Corn) Zm00025a041963 , Zm00025a051763
Brachypodium KQK17051 , KQJ93544
Barley HORVU6Hr1G032200.3 , HORVU6Hr1G032200.2 , HORVU6Hr1G032200.1 , HORVU6Hr1G032200.4
Wheat TraesCS6B02G185700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G256200 expressed protein -
2 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
5 Sobic.002G373800 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
6 Sobic.003G316850 - -
7 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
8 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
9 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
10 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
11 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
12 Sobic.003G420700 expressed protein -
13 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
15 Sobic.004G339200 CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed -
16 Sobic.006G225300 expressed protein -
17 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
18 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
19 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
20 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2


Gene co-expression network
sample Sobic010G221400 Sobic010G221400 Sobic009G256200 Sobic009G256200 Sobic010G221400--Sobic009G256200 Sobic010G193800 Sobic010G193800 Sobic010G221400--Sobic010G193800 Sobic002G256300 Sobic002G256300 Sobic010G221400--Sobic002G256300 Sobic008G161800 Sobic008G161800 Sobic010G221400--Sobic008G161800 Sobic002G373800 Sobic002G373800 Sobic010G221400--Sobic002G373800 Sobic003G316850 Sobic003G316850 Sobic010G221400--Sobic003G316850 Sobic009G246950 Sobic009G246950 Sobic010G221400--Sobic009G246950 Sobic001G415500 Sobic001G415500 Sobic010G221400--Sobic001G415500 Sobic009G036900 Sobic009G036900 Sobic010G221400--Sobic009G036900 Sobic009G256200--Sobic010G221400 Sobic009G171700 Sobic009G171700 Sobic009G256200--Sobic009G171700 Sobic009G256200--Sobic010G193800 Sobic010G101200 Sobic010G101200 Sobic009G256200--Sobic010G101200 Sobic009G256200--Sobic003G316850 Sobic009G256200--Sobic002G256300 Sobic009G256200--Sobic009G246950 Sobic004G203100 Sobic004G203100 Sobic009G256200--Sobic004G203100 Sobic002G352700 Sobic002G352700 Sobic009G256200--Sobic002G352700 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic001G439600 Sobic001G439600 Sobic010G193800--Sobic001G439600 Sobic004G141700 Sobic004G141700 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic002G256300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic002G256300--Sobic010G083700 Sobic004G104900 Sobic004G104900 Sobic002G256300--Sobic004G104900 Sobic010G168600 Sobic010G168600 Sobic002G256300--Sobic010G168600 Sobic001G136900 Sobic001G136900 Sobic002G256300--Sobic001G136900 Sobic002G256300--Sobic010G193800 Sobic002G256300--Sobic001G439600 Sobic006G263900 Sobic006G263900 Sobic002G256300--Sobic006G263900 Sobic002G256300--Sobic009G171700 Sobic002G263800 Sobic002G263800 Sobic008G161800--Sobic002G263800 Sobic006G141500 Sobic006G141500 Sobic008G161800--Sobic006G141500 Sobic008G161800--Sobic001G415500 Sobic003G253000 Sobic003G253000 Sobic008G161800--Sobic003G253000 Sobic006G108400 Sobic006G108400 Sobic008G161800--Sobic006G108400 Sobic007G095400 Sobic007G095400 Sobic008G161800--Sobic007G095400 Sobic010G154700 Sobic010G154700 Sobic008G161800--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G161800--Sobic001G132100 Sobic004G248800 Sobic004G248800 Sobic008G161800--Sobic004G248800 Sobic001G517600 Sobic001G517600 Sobic002G373800--Sobic001G517600 Sobic010G173100 Sobic010G173100 Sobic002G373800--Sobic010G173100 Sobic002G406500 Sobic002G406500 Sobic002G373800--Sobic002G406500 Sobic002G373800--Sobic002G263800 Sobic003G280700 Sobic003G280700 Sobic002G373800--Sobic003G280700 Sobic001G436200 Sobic001G436200 Sobic002G373800--Sobic001G436200 Sobic005G111100 Sobic005G111100 Sobic002G373800--Sobic005G111100 Sobic001G011200 Sobic001G011200 Sobic002G373800--Sobic001G011200 Sobic002G374900 Sobic002G374900 Sobic002G373800--Sobic002G374900 Sobic004G316900 Sobic004G316900 Sobic003G316850--Sobic004G316900 Sobic001G501200 Sobic001G501200 Sobic003G316850--Sobic001G501200 Sobic004G339200 Sobic004G339200 Sobic003G316850--Sobic004G339200 Sobic003G316850--Sobic010G193800 Sobic002G204000 Sobic002G204000 Sobic003G316850--Sobic002G204000 Sobic003G316850--Sobic009G256200 Sobic010G051500 Sobic010G051500 Sobic003G316850--Sobic010G051500 Sobic003G316850--Sobic010G221400 Sobic003G043400 Sobic003G043400 Sobic003G316850--Sobic003G043400 Sobic009G246950--Sobic002G256300 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic009G246950--Sobic001G054200 Sobic007G186300 Sobic007G186300 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic001G007200 Sobic001G007200 Sobic009G246950--Sobic001G007200 Sobic001G415500--Sobic001G007200 Sobic001G415500--Sobic008G161800 Sobic001G415500--Sobic003G253000 Sobic009G146100 Sobic009G146100 Sobic001G415500--Sobic009G146100 Sobic001G415500--Sobic006G108400 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500
Octagon: transcription factors


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