Gene annotation
Transcriptome id Sobic.010G101200.1
Synonym Sb10g008810
Functional annotation B12D protein, putative, expressed
UniProt C5Z7K7
Pfam PF06522
Panther DB PTHR33417
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48140 : B12D protein
RAP-DB (Rice) LOC_Os06g13680.1 : B12D protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G238600 , TraesCS7B02G103600 , TraesCS7D02G199700
Populus -


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cDNA sequences
Sobic.010G101200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G173100 elongation factor 1-gamma, putative, expressed K03233: elongation factor 1-gamma
2 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
4 Sobic.001G022900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
5 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
6 Sobic.009G256200 expressed protein -
7 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
8 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
9 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
10 Sobic.002G282400 expressed protein -
11 Sobic.001G037000 PHD finger protein, putative, expressed -
12 Sobic.002G373800 elongation factor protein, putative, expressed K03232: elongation factor 1-beta
13 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
14 Sobic.008G161000 protein kinase domain containing protein, expressed -
15 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
16 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
17 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
18 Sobic.006G141500 expressed protein -
19 Sobic.007G095400 expressed protein -
20 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic010G101200 Sobic010G101200 Sobic010G173100 Sobic010G173100 Sobic010G101200--Sobic010G173100 Sobic002G068300 Sobic002G068300 Sobic010G101200--Sobic002G068300 Sobic009G016201 Sobic009G016201 Sobic010G101200--Sobic009G016201 Sobic001G022900 Sobic001G022900 Sobic010G101200--Sobic001G022900 Sobic002G263800 Sobic002G263800 Sobic010G101200--Sobic002G263800 Sobic009G256200 Sobic009G256200 Sobic010G101200--Sobic009G256200 Sobic008G161800 Sobic008G161800 Sobic010G101200--Sobic008G161800 Sobic009G036900 Sobic009G036900 Sobic010G101200--Sobic009G036900 Sobic010G237000 Sobic010G237000 Sobic010G101200--Sobic010G237000 Sobic010G173100--Sobic002G263800 Sobic002G373800 Sobic002G373800 Sobic010G173100--Sobic002G373800 Sobic003G107600 Sobic003G107600 Sobic010G173100--Sobic003G107600 Sobic010G182600 Sobic010G182600 Sobic010G173100--Sobic010G182600 Sobic009G065400 Sobic009G065400 Sobic010G173100--Sobic009G065400 Sobic010G173100--Sobic008G161800 Sobic002G406500 Sobic002G406500 Sobic010G173100--Sobic002G406500 Sobic001G011200 Sobic001G011200 Sobic010G173100--Sobic001G011200 Sobic001G046300 Sobic001G046300 Sobic010G173100--Sobic001G046300 Sobic002G068300--Sobic009G036900 Sobic010G228600 Sobic010G228600 Sobic002G068300--Sobic010G228600 Sobic002G068300--Sobic009G016201 Sobic006G256500 Sobic006G256500 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic003G249800 Sobic003G249800 Sobic002G068300--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic001G037000 Sobic001G037000 Sobic009G016201--Sobic001G037000 Sobic008G161000 Sobic008G161000 Sobic009G016201--Sobic008G161000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic006G108400 Sobic006G108400 Sobic001G022900--Sobic006G108400 Sobic008G179500 Sobic008G179500 Sobic001G022900--Sobic008G179500 Sobic003G253000 Sobic003G253000 Sobic001G022900--Sobic003G253000 Sobic004G049900 Sobic004G049900 Sobic001G022900--Sobic004G049900 Sobic001G415500 Sobic001G415500 Sobic001G022900--Sobic001G415500 Sobic001G022900--Sobic010G173100 Sobic001G022900--Sobic008G161800 Sobic006G141500 Sobic006G141500 Sobic001G022900--Sobic006G141500 Sobic009G111600 Sobic009G111600 Sobic001G022900--Sobic009G111600 Sobic002G263800--Sobic008G161800 Sobic002G263800--Sobic007G095400 Sobic001G483100 Sobic001G483100 Sobic002G263800--Sobic001G483100 Sobic009G180000 Sobic009G180000 Sobic002G263800--Sobic009G180000 Sobic002G263800--Sobic010G173100 Sobic010G039800 Sobic010G039800 Sobic002G263800--Sobic010G039800 Sobic002G263800--Sobic009G016201 Sobic010G204500 Sobic010G204500 Sobic002G263800--Sobic010G204500 Sobic004G310300 Sobic004G310300 Sobic002G263800--Sobic004G310300 Sobic010G221400 Sobic010G221400 Sobic009G256200--Sobic010G221400 Sobic009G171700 Sobic009G171700 Sobic009G256200--Sobic009G171700 Sobic010G193800 Sobic010G193800 Sobic009G256200--Sobic010G193800 Sobic009G256200--Sobic010G101200 Sobic003G316850 Sobic003G316850 Sobic009G256200--Sobic003G316850 Sobic002G256300 Sobic002G256300 Sobic009G256200--Sobic002G256300 Sobic009G246950 Sobic009G246950 Sobic009G256200--Sobic009G246950 Sobic004G203100 Sobic004G203100 Sobic009G256200--Sobic004G203100 Sobic002G352700 Sobic002G352700 Sobic009G256200--Sobic002G352700 Sobic008G161800--Sobic002G263800 Sobic008G161800--Sobic006G141500 Sobic008G161800--Sobic001G415500 Sobic008G161800--Sobic003G253000 Sobic008G161800--Sobic006G108400 Sobic008G161800--Sobic007G095400 Sobic010G154700 Sobic010G154700 Sobic008G161800--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G161800--Sobic001G132100 Sobic004G248800 Sobic004G248800 Sobic008G161800--Sobic004G248800 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic009G036900--Sobic010G228600 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic010G237000--Sobic009G016201 Sobic003G344600 Sobic003G344600 Sobic010G237000--Sobic003G344600 Sobic010G237000--Sobic001G037000 Sobic002G330000 Sobic002G330000 Sobic010G237000--Sobic002G330000 Sobic001G128400 Sobic001G128400 Sobic010G237000--Sobic001G128400 Sobic010G237000--Sobic003G249800 Sobic010G237000--Sobic002G282400 Sobic003G254800 Sobic003G254800 Sobic010G237000--Sobic003G254800 Sobic003G350300 Sobic003G350300 Sobic010G237000--Sobic003G350300
Octagon: transcription factors


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