Gene annotation
Transcriptome id Sobic.003G416600.3,Sobic.003G416600.4,Sobic.003G416600.2,Sobic.003G416600.1
Synonym Sb03g045010
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt A0A1B6Q821 , A0A1B6Q832 , A0A1B6Q819
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF389
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology K15108; SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48970 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os01g70800.2,LOC_Os01g70800.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a026133 , Zm00025a039192
Brachypodium KQK11393 , KQK11392 , KQK11391
Barley HORVU3Hr1G098170.1 , HORVU3Hr1G098170.2 , HORVU3Hr1G098170.3 , HORVU3Hr1G098170.4 , HORVU3Hr1G098170.6 , HORVU3Hr1G098170.7 , HORVU3Hr1G098170.8 , HORVU3Hr1G098170.9 , HORVU3Hr1G098170.5 , HORVU3Hr1G098170.12 , HORVU3Hr1G098170.13 , HORVU3Hr1G098170.11
Wheat TraesCS3A02G454400 , TraesCS3A02G454400 , TraesCS3A02G454400 , TraesCS3D02G446800 , TraesCS3D02G446800 , TraesCS3B02G493000
Populus -


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cDNA sequences
Sobic.003G416600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
2 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
3 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
4 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
5 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
6 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
8 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
9 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
10 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
11 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
12 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
13 Sobic.007G038800 expressed protein -
14 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
15 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
17 Sobic.009G171700 SAG20, putative, expressed -
18 Sobic.008G180900 YIF1B, putative, expressed -
19 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
20 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta


Gene co-expression network
sample Sobic003G416600 Sobic003G416600 Sobic004G122000 Sobic004G122000 Sobic003G416600--Sobic004G122000 Sobic009G232800 Sobic009G232800 Sobic003G416600--Sobic009G232800 Sobic009G036900 Sobic009G036900 Sobic003G416600--Sobic009G036900 Sobic002G276900 Sobic002G276900 Sobic003G416600--Sobic002G276900 Sobic004G248800 Sobic004G248800 Sobic003G416600--Sobic004G248800 Sobic003G403400 Sobic003G403400 Sobic003G416600--Sobic003G403400 Sobic009G034400 Sobic009G034400 Sobic003G416600--Sobic009G034400 Sobic006G062800 Sobic006G062800 Sobic003G416600--Sobic006G062800 Sobic001G367000 Sobic001G367000 Sobic003G416600--Sobic001G367000 Sobic004G122000--Sobic009G034400 Sobic004G048700 Sobic004G048700 Sobic004G122000--Sobic004G048700 Sobic004G122000--Sobic009G036900 Sobic002G176400 Sobic002G176400 Sobic004G122000--Sobic002G176400 Sobic004G122000--Sobic003G416600 Sobic001G036700 Sobic001G036700 Sobic004G122000--Sobic001G036700 Sobic008G108500 Sobic008G108500 Sobic004G122000--Sobic008G108500 Sobic007G192100 Sobic007G192100 Sobic004G122000--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic004G122000--Sobic001G285300 Sobic001G389900 Sobic001G389900 Sobic009G232800--Sobic001G389900 Sobic009G232800--Sobic003G403400 Sobic002G251900 Sobic002G251900 Sobic009G232800--Sobic002G251900 Sobic009G232800--Sobic006G062800 Sobic002G046100 Sobic002G046100 Sobic009G232800--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic009G232800--Sobic003G285800 Sobic004G024200 Sobic004G024200 Sobic009G232800--Sobic004G024200 Sobic001G447100 Sobic001G447100 Sobic009G232800--Sobic001G447100 Sobic003G249800 Sobic003G249800 Sobic009G232800--Sobic003G249800 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic006G261100 Sobic006G261100 Sobic002G276900--Sobic006G261100 Sobic006G099800 Sobic006G099800 Sobic002G276900--Sobic006G099800 Sobic009G100300 Sobic009G100300 Sobic002G276900--Sobic009G100300 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic010G253100 Sobic010G253100 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic006G141500 Sobic006G141500 Sobic004G248800--Sobic006G141500 Sobic004G248800--Sobic001G529000 Sobic004G248800--Sobic010G039800 Sobic003G253000 Sobic003G253000 Sobic004G248800--Sobic003G253000 Sobic004G293700 Sobic004G293700 Sobic004G248800--Sobic004G293700 Sobic008G161800 Sobic008G161800 Sobic004G248800--Sobic008G161800 Sobic002G263800 Sobic002G263800 Sobic004G248800--Sobic002G263800 Sobic002G218000 Sobic002G218000 Sobic004G248800--Sobic002G218000 Sobic004G248800--Sobic003G249800 Sobic003G403400--Sobic001G389900 Sobic001G066700 Sobic001G066700 Sobic003G403400--Sobic001G066700 Sobic003G063200 Sobic003G063200 Sobic003G403400--Sobic003G063200 Sobic003G403400--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic003G403400--Sobic005G111100 Sobic003G350300 Sobic003G350300 Sobic003G403400--Sobic003G350300 Sobic010G225300 Sobic010G225300 Sobic003G403400--Sobic010G225300 Sobic003G403400--Sobic009G232800 Sobic004G265700 Sobic004G265700 Sobic003G403400--Sobic004G265700 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic009G034400--Sobic004G122000 Sobic009G034400--Sobic010G071200 Sobic009G034400--Sobic010G228600 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic009G034400--Sobic002G179500 Sobic001G309100 Sobic001G309100 Sobic009G034400--Sobic001G309100 Sobic010G213400 Sobic010G213400 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic009G033700 Sobic009G033700 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900 Sobic001G367000--Sobic001G529000 Sobic004G224800 Sobic004G224800 Sobic001G367000--Sobic004G224800 Sobic006G222400 Sobic006G222400 Sobic001G367000--Sobic006G222400 Sobic002G090700 Sobic002G090700 Sobic001G367000--Sobic002G090700 Sobic003G362400 Sobic003G362400 Sobic001G367000--Sobic003G362400 Sobic001G054200 Sobic001G054200 Sobic001G367000--Sobic001G054200 Sobic001G126200 Sobic001G126200 Sobic001G367000--Sobic001G126200 Sobic003G124800 Sobic003G124800 Sobic001G367000--Sobic003G124800 Sobic010G065400 Sobic010G065400 Sobic001G367000--Sobic010G065400
Octagon: transcription factors


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