Gene annotation
Transcriptome id Sobic.006G096400.1,Sobic.006G096400.2
Synonym Sb06g018120
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1B6PL71 , A0A1B6PL66
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF239
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G59960 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os04g37490.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011198 , Zm00025a056155
Brachypodium KQJ82856
Barley HORVU2Hr1G078570.16 , HORVU2Hr1G078570.15 , HORVU2Hr1G078570.12 , HORVU2Hr1G078570.11 , HORVU2Hr1G078570.10 , HORVU2Hr1G078570.9 , HORVU2Hr1G078570.8 , HORVU2Hr1G078570.7 , HORVU2Hr1G078570.6 , HORVU2Hr1G078570.4 , HORVU2Hr1G078570.3 , HORVU2Hr1G078570.2 , HORVU2Hr1G078570.1
Wheat TraesCS2B02G547800 , TraesCS2B02G333900 , TraesCS2A02G315700 , TraesCS2D02G313700 , TraesCS2A02G315600
Populus -


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cDNA sequences
Sobic.006G096400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G172500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
2 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
3 Sobic.008G179500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
4 Sobic.001G026900 cytidine deaminase, putative, expressed -
5 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
6 Sobic.002G381300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
7 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
8 Sobic.009G111600 expressed protein -
9 Sobic.003G229200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed K07424: cytochrome P450 family 3 subfamily A
10 Sobic.010G224200 MYB family transcription factor, putative, expressed -
11 Sobic.004G276100 expressed protein -
12 Sobic.002G083266 - K00326: cytochrome-b5 reductase
13 Sobic.003G047100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K12261: 2-hydroxyacyl-CoA lyase 1
14 Sobic.004G205000 cytosolic Fe-S cluster assembling factor NBP35, putative, expressed -
15 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
16 Sobic.009G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
18 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
19 Sobic.005G152200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
20 Sobic.004G058000 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G096400 Sobic006G096400 Sobic009G172500 Sobic009G172500 Sobic006G096400--Sobic009G172500 Sobic010G016400 Sobic010G016400 Sobic006G096400--Sobic010G016400 Sobic008G179500 Sobic008G179500 Sobic006G096400--Sobic008G179500 Sobic001G026900 Sobic001G026900 Sobic006G096400--Sobic001G026900 Sobic001G010400 Sobic001G010400 Sobic006G096400--Sobic001G010400 Sobic002G381300 Sobic002G381300 Sobic006G096400--Sobic002G381300 Sobic002G024100 Sobic002G024100 Sobic006G096400--Sobic002G024100 Sobic009G111600 Sobic009G111600 Sobic006G096400--Sobic009G111600 Sobic003G229200 Sobic003G229200 Sobic006G096400--Sobic003G229200 Sobic009G172500--Sobic006G096400 Sobic009G172500--Sobic010G016400 Sobic010G206000 Sobic010G206000 Sobic009G172500--Sobic010G206000 Sobic002G322900 Sobic002G322900 Sobic009G172500--Sobic002G322900 Sobic009G172500--Sobic002G381300 Sobic009G016800 Sobic009G016800 Sobic009G172500--Sobic009G016800 Sobic005G139400 Sobic005G139400 Sobic009G172500--Sobic005G139400 Sobic009G172500--Sobic002G024100 Sobic009G161401 Sobic009G161401 Sobic009G172500--Sobic009G161401 Sobic010G016400--Sobic005G139400 Sobic009G167700 Sobic009G167700 Sobic010G016400--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic010G016400--Sobic004G347300 Sobic006G119200 Sobic006G119200 Sobic010G016400--Sobic006G119200 Sobic007G148800 Sobic007G148800 Sobic010G016400--Sobic007G148800 Sobic006G217700 Sobic006G217700 Sobic010G016400--Sobic006G217700 Sobic010G016400--Sobic001G010400 Sobic004G102400 Sobic004G102400 Sobic010G016400--Sobic004G102400 Sobic010G016400--Sobic009G172500 Sobic004G276100 Sobic004G276100 Sobic008G179500--Sobic004G276100 Sobic008G179500--Sobic009G111600 Sobic001G022900 Sobic001G022900 Sobic008G179500--Sobic001G022900 Sobic004G277000 Sobic004G277000 Sobic008G179500--Sobic004G277000 Sobic003G333400 Sobic003G333400 Sobic008G179500--Sobic003G333400 Sobic002G083266 Sobic002G083266 Sobic008G179500--Sobic002G083266 Sobic004G050000 Sobic004G050000 Sobic008G179500--Sobic004G050000 Sobic004G301400 Sobic004G301400 Sobic008G179500--Sobic004G301400 Sobic001G399100 Sobic001G399100 Sobic008G179500--Sobic001G399100 Sobic001G227500 Sobic001G227500 Sobic001G026900--Sobic001G227500 Sobic002G090200 Sobic002G090200 Sobic001G026900--Sobic002G090200 Sobic001G026900--Sobic004G050000 Sobic001G026900--Sobic004G276100 Sobic001G026900--Sobic004G277000 Sobic001G026900--Sobic002G083266 Sobic002G267500 Sobic002G267500 Sobic001G026900--Sobic002G267500 Sobic001G026900--Sobic008G179500 Sobic002G249000 Sobic002G249000 Sobic001G026900--Sobic002G249000 Sobic001G010400--Sobic002G249000 Sobic001G010400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic001G010400--Sobic010G016400 Sobic005G215900 Sobic005G215900 Sobic002G381300--Sobic005G215900 Sobic005G016800 Sobic005G016800 Sobic002G381300--Sobic005G016800 Sobic009G236200 Sobic009G236200 Sobic002G381300--Sobic009G236200 Sobic002G381300--Sobic009G016800 Sobic002G381300--Sobic006G096400 Sobic002G381300--Sobic009G172500 Sobic001G151800 Sobic001G151800 Sobic002G381300--Sobic001G151800 Sobic001G156300 Sobic001G156300 Sobic002G381300--Sobic001G156300 Sobic002G381300--Sobic004G185900 Sobic005G152200 Sobic005G152200 Sobic002G024100--Sobic005G152200 Sobic001G386400 Sobic001G386400 Sobic002G024100--Sobic001G386400 Sobic003G280900 Sobic003G280900 Sobic002G024100--Sobic003G280900 Sobic002G024100--Sobic006G096400 Sobic002G242500 Sobic002G242500 Sobic002G024100--Sobic002G242500 Sobic002G024100--Sobic003G229200 Sobic002G024100--Sobic010G016400 Sobic002G024100--Sobic009G167700 Sobic002G024100--Sobic009G172500 Sobic004G284500 Sobic004G284500 Sobic009G111600--Sobic004G284500 Sobic001G403700 Sobic001G403700 Sobic009G111600--Sobic001G403700 Sobic009G111600--Sobic004G276100 Sobic009G111600--Sobic008G179500 Sobic009G111600--Sobic002G083266 Sobic003G367451 Sobic003G367451 Sobic009G111600--Sobic003G367451 Sobic010G213400 Sobic010G213400 Sobic009G111600--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic009G111600--Sobic004G272800 Sobic009G111600--Sobic001G399100 Sobic003G229200--Sobic009G161401 Sobic001G302500 Sobic001G302500 Sobic003G229200--Sobic001G302500 Sobic003G229200--Sobic006G096400 Sobic003G229200--Sobic002G024100 Sobic003G273700 Sobic003G273700 Sobic003G229200--Sobic003G273700 Sobic003G080900 Sobic003G080900 Sobic003G229200--Sobic003G080900 Sobic003G229200--Sobic004G347300 Sobic007G078100 Sobic007G078100 Sobic003G229200--Sobic007G078100 Sobic003G229200--Sobic005G152200
Octagon: transcription factors


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