Gene annotation
Transcriptome id Sobic.004G205000.2,Sobic.004G205000.1
Synonym Sb04g025110, ATNBP35, NBP35
Functional annotation cytosolic Fe-S cluster assembling factor NBP35, putative, expressed
UniProt A0A194YQR3 , A0A194YRW2
Pfam PF01656 PF10609
Panther DB PTHR23264
NCBI CDD KOG3022; Predicted ATPase, nucleotide-binding
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50960 : nucleotide binding protein 35
RAP-DB (Rice) LOC_Os04g40880.3 : nucleotide-binding protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a031860 , Zm00025a021283
Brachypodium KQK00205
Barley HORVU6Hr1G054280.3 , HORVU6Hr1G054280.2 , HORVU6Hr1G054280.1 , HORVU6Hr1G054280.4
Wheat TraesCS7B02G234100 , TraesCS7B02G234100 , TraesCS6A02G211400 , TraesCS6A02G211400 , TraesCS6B02G243300 , TraesCS6B02G243300 , TraesCS6D02G195900 , TraesCS6D02G195900
Populus -


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cDNA sequences
Sobic.004G205000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G177700 AIG1, putative, expressed -
2 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
4 Sobic.002G083266 - K00326: cytochrome-b5 reductase
5 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
6 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
7 Sobic.010G086200 GRAM domain containing protein, expressed -
8 Sobic.007G198100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane protein, putative, expressed -
9 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
10 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.001G281400 expressed protein -
12 Sobic.009G153600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NC domain-containing protein, putative, expressed -
13 Sobic.004G277000 purine permease, putative, expressed -
14 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.010G224200 MYB family transcription factor, putative, expressed -
16 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
17 Sobic.009G111600 expressed protein -
18 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
19 Sobic.008G179500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
20 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -


Gene co-expression network
sample Sobic004G205000 Sobic004G205000 Sobic004G177700 Sobic004G177700 Sobic004G205000--Sobic004G177700 Sobic002G267500 Sobic002G267500 Sobic004G205000--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic004G205000--Sobic010G149300 Sobic002G083266 Sobic002G083266 Sobic004G205000--Sobic002G083266 Sobic005G034400 Sobic005G034400 Sobic004G205000--Sobic005G034400 Sobic004G272800 Sobic004G272800 Sobic004G205000--Sobic004G272800 Sobic010G086200 Sobic010G086200 Sobic004G205000--Sobic010G086200 Sobic007G198100 Sobic007G198100 Sobic004G205000--Sobic007G198100 Sobic009G143400 Sobic009G143400 Sobic004G205000--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic004G177700--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic004G177700--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic004G177700--Sobic006G275200 Sobic010G099900 Sobic010G099900 Sobic004G177700--Sobic010G099900 Sobic009G008900 Sobic009G008900 Sobic004G177700--Sobic009G008900 Sobic004G177700--Sobic010G086200 Sobic004G177700--Sobic010G149300 Sobic006G230500 Sobic006G230500 Sobic004G177700--Sobic006G230500 Sobic002G414600 Sobic002G414600 Sobic004G177700--Sobic002G414600 Sobic001G281400 Sobic001G281400 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G046100 Sobic002G046100 Sobic002G267500--Sobic002G046100 Sobic003G253000 Sobic003G253000 Sobic002G267500--Sobic003G253000 Sobic002G267500--Sobic010G149300 Sobic002G345300 Sobic002G345300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic002G267500--Sobic009G143400 Sobic002G267500--Sobic006G173900 Sobic010G149300--Sobic001G281400 Sobic010G149300--Sobic010G086200 Sobic010G149300--Sobic002G267500 Sobic010G149300--Sobic009G143400 Sobic003G181500 Sobic003G181500 Sobic010G149300--Sobic003G181500 Sobic010G149300--Sobic002G046100 Sobic010G149300--Sobic004G177700 Sobic010G149300--Sobic002G345300 Sobic009G129000 Sobic009G129000 Sobic010G149300--Sobic009G129000 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic002G083266--Sobic004G272800 Sobic008G033600 Sobic008G033600 Sobic005G034400--Sobic008G033600 Sobic004G055200 Sobic004G055200 Sobic005G034400--Sobic004G055200 Sobic005G034400--Sobic001G459200 Sobic004G020000 Sobic004G020000 Sobic005G034400--Sobic004G020000 Sobic005G034400--Sobic003G253000 Sobic002G264400 Sobic002G264400 Sobic005G034400--Sobic002G264400 Sobic005G034400--Sobic001G224400 Sobic005G034400--Sobic002G267500 Sobic001G288800 Sobic001G288800 Sobic005G034400--Sobic001G288800 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic004G272800--Sobic002G345300 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100 Sobic006G267200 Sobic006G267200 Sobic010G086200--Sobic006G267200 Sobic004G065500 Sobic004G065500 Sobic010G086200--Sobic004G065500 Sobic004G321300 Sobic004G321300 Sobic010G086200--Sobic004G321300 Sobic009G141800 Sobic009G141800 Sobic010G086200--Sobic009G141800 Sobic010G086200--Sobic009G129000 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic009G033700 Sobic009G033700 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic007G198100--Sobic009G033700 Sobic007G198100--Sobic010G086200 Sobic002G356101 Sobic002G356101 Sobic007G198100--Sobic002G356101 Sobic009G200700 Sobic009G200700 Sobic007G198100--Sobic009G200700 Sobic003G037800 Sobic003G037800 Sobic007G198100--Sobic003G037800 Sobic003G019200 Sobic003G019200 Sobic007G198100--Sobic003G019200 Sobic007G198100--Sobic001G281400 Sobic007G198100--Sobic009G143400 Sobic007G198100--Sobic010G213400 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic009G143400--Sobic001G281400 Sobic009G143400--Sobic002G046100 Sobic009G143400--Sobic010G149300 Sobic009G143400--Sobic002G190900 Sobic009G143400--Sobic009G033700
Octagon: transcription factors


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