Gene annotation
Transcriptome id Sobic.009G153600.1
Synonym Sb09g021710
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
NC domain-containing protein, putative, expressed
UniProt A0A109NDD4 , C5YYR6
Pfam PF04970
Panther DB PTHR13943 PTHR13943:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06370 : NC domain-containing protein-related
RAP-DB (Rice) LOC_Os05g36910.1 : NC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037259
Brachypodium PNT71172 , KQK06035
Barley HORVU1Hr1G074130.1 , HORVU1Hr1G074130.2 , HORVU1Hr1G074130.3
Wheat TraesCS1A02G275200 , TraesCS1D02G274800 , TraesCS1B02G284400
Populus -


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cDNA sequences
Sobic.009G153600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G177700 AIG1, putative, expressed -
2 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.004G205000 cytosolic Fe-S cluster assembling factor NBP35, putative, expressed -
4 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
5 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
6 Sobic.001G037000 PHD finger protein, putative, expressed -
7 Sobic.003G379800 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
9 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
10 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
11 Sobic.006G139700 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
12 Sobic.010G086200 GRAM domain containing protein, expressed -
13 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
14 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
15 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
16 Sobic.002G261900 arabinogalactan protein, putative, expressed -
17 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44


Gene co-expression network
sample Sobic009G153600 Sobic009G153600 Sobic004G177700 Sobic004G177700 Sobic009G153600--Sobic004G177700 Sobic010G163600 Sobic010G163600 Sobic009G153600--Sobic010G163600 Sobic004G205000 Sobic004G205000 Sobic009G153600--Sobic004G205000 Sobic010G153100 Sobic010G153100 Sobic009G153600--Sobic010G153100 Sobic001G066700 Sobic001G066700 Sobic009G153600--Sobic001G066700 Sobic001G037000 Sobic001G037000 Sobic009G153600--Sobic001G037000 Sobic003G379800 Sobic003G379800 Sobic009G153600--Sobic003G379800 Sobic009G143400 Sobic009G143400 Sobic009G153600--Sobic009G143400 Sobic010G217900 Sobic010G217900 Sobic009G153600--Sobic010G217900 Sobic006G173900 Sobic006G173900 Sobic004G177700--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic004G177700--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic004G177700--Sobic006G275200 Sobic010G099900 Sobic010G099900 Sobic004G177700--Sobic010G099900 Sobic009G008900 Sobic009G008900 Sobic004G177700--Sobic009G008900 Sobic010G086200 Sobic010G086200 Sobic004G177700--Sobic010G086200 Sobic010G149300 Sobic010G149300 Sobic004G177700--Sobic010G149300 Sobic006G230500 Sobic006G230500 Sobic004G177700--Sobic006G230500 Sobic002G414600 Sobic002G414600 Sobic004G177700--Sobic002G414600 Sobic010G213400 Sobic010G213400 Sobic010G163600--Sobic010G213400 Sobic006G141500 Sobic006G141500 Sobic010G163600--Sobic006G141500 Sobic004G300900 Sobic004G300900 Sobic010G163600--Sobic004G300900 Sobic003G362400 Sobic003G362400 Sobic010G163600--Sobic003G362400 Sobic004G284500 Sobic004G284500 Sobic010G163600--Sobic004G284500 Sobic001G445800 Sobic001G445800 Sobic010G163600--Sobic001G445800 Sobic002G046100 Sobic002G046100 Sobic010G163600--Sobic002G046100 Sobic003G249800 Sobic003G249800 Sobic010G163600--Sobic003G249800 Sobic002G078400 Sobic002G078400 Sobic010G163600--Sobic002G078400 Sobic004G205000--Sobic004G177700 Sobic002G267500 Sobic002G267500 Sobic004G205000--Sobic002G267500 Sobic004G205000--Sobic010G149300 Sobic002G083266 Sobic002G083266 Sobic004G205000--Sobic002G083266 Sobic005G034400 Sobic005G034400 Sobic004G205000--Sobic005G034400 Sobic004G272800 Sobic004G272800 Sobic004G205000--Sobic004G272800 Sobic004G205000--Sobic010G086200 Sobic007G198100 Sobic007G198100 Sobic004G205000--Sobic007G198100 Sobic004G205000--Sobic009G143400 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic010G153100--Sobic006G141500 Sobic003G358300 Sobic003G358300 Sobic001G066700--Sobic003G358300 Sobic003G403400 Sobic003G403400 Sobic001G066700--Sobic003G403400 Sobic002G218000 Sobic002G218000 Sobic001G066700--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic003G233500 Sobic003G233500 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G422900 Sobic001G422900 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic003G181500 Sobic003G181500 Sobic001G037000--Sobic003G181500 Sobic003G379800--Sobic009G143400 Sobic004G061200 Sobic004G061200 Sobic003G379800--Sobic004G061200 Sobic003G393700 Sobic003G393700 Sobic003G379800--Sobic003G393700 Sobic004G069200 Sobic004G069200 Sobic003G379800--Sobic004G069200 Sobic001G389000 Sobic001G389000 Sobic003G379800--Sobic001G389000 Sobic003G379800--Sobic010G086200 Sobic001G070800 Sobic001G070800 Sobic003G379800--Sobic001G070800 Sobic003G379800--Sobic002G393000 Sobic009G159200 Sobic009G159200 Sobic003G379800--Sobic009G159200 Sobic009G143400--Sobic010G086200 Sobic009G143400--Sobic003G393700 Sobic009G143400--Sobic004G061200 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic009G143400--Sobic002G046100 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700 Sobic010G217900--Sobic001G067601 Sobic001G019900 Sobic001G019900 Sobic010G217900--Sobic001G019900 Sobic005G228000 Sobic005G228000 Sobic010G217900--Sobic005G228000 Sobic001G533300 Sobic001G533300 Sobic010G217900--Sobic001G533300 Sobic004G247200 Sobic004G247200 Sobic010G217900--Sobic004G247200 Sobic010G217900--Sobic001G037000 Sobic003G162700 Sobic003G162700 Sobic010G217900--Sobic003G162700 Sobic010G217900--Sobic004G177700 Sobic005G028700 Sobic005G028700 Sobic010G217900--Sobic005G028700
Octagon: transcription factors


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