Gene annotation
Transcriptome id Sobic.006G139700.1
Synonym Sb06g021890, VFB1
Functional annotation OsFBL19 - F-box domain and LRR containing protein, expressed
UniProt A0A1B6PLW8
Pfam -
Panther DB PTHR24006 PTHR24006:SF481
NCBI CDD -
KEGG Orthology K10273; F-box and leucine-rich repeat protein 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47056 : VIER F-box proteine 1
RAP-DB (Rice) LOC_Os04g42670.1 : OsFBL19 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a010757 , Zm00025a056436 , Zm00025a056434
Brachypodium KQJ83451
Barley HORVU0Hr1G005070.1 , HORVU0Hr1G005070.2 , HORVU0Hr1G005070.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
2 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
3 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
4 Sobic.010G180700 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
5 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
6 Sobic.007G186800 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
7 Sobic.003G368500 Yip1 domain containing protein, expressed -
8 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
9 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
10 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
11 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
12 Sobic.002G261900 arabinogalactan protein, putative, expressed -
13 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
14 Sobic.008G127500 expressed protein -
15 Sobic.001G041100 RNA recognition motif containing protein, putative, expressed K12833: pre-mRNA branch site protein p14
16 Sobic.003G104700 Rer1 protein, putative, expressed -
17 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
18 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
19 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
20 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23


Gene co-expression network
sample Sobic006G139700 Sobic006G139700 Sobic006G010600 Sobic006G010600 Sobic006G139700--Sobic006G010600 Sobic005G111100 Sobic005G111100 Sobic006G139700--Sobic005G111100 Sobic001G018500 Sobic001G018500 Sobic006G139700--Sobic001G018500 Sobic010G180700 Sobic010G180700 Sobic006G139700--Sobic010G180700 Sobic003G150000 Sobic003G150000 Sobic006G139700--Sobic003G150000 Sobic007G186800 Sobic007G186800 Sobic006G139700--Sobic007G186800 Sobic003G368500 Sobic003G368500 Sobic006G139700--Sobic003G368500 Sobic002G222900 Sobic002G222900 Sobic006G139700--Sobic002G222900 Sobic007G134000 Sobic007G134000 Sobic006G139700--Sobic007G134000 Sobic004G103700 Sobic004G103700 Sobic006G010600--Sobic004G103700 Sobic001G445800 Sobic001G445800 Sobic006G010600--Sobic001G445800 Sobic004G145801 Sobic004G145801 Sobic006G010600--Sobic004G145801 Sobic001G172000 Sobic001G172000 Sobic006G010600--Sobic001G172000 Sobic010G204600 Sobic010G204600 Sobic006G010600--Sobic010G204600 Sobic006G010600--Sobic003G368500 Sobic003G181500 Sobic003G181500 Sobic006G010600--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic006G010600--Sobic002G078400 Sobic004G310300 Sobic004G310300 Sobic006G010600--Sobic004G310300 Sobic001G128400 Sobic001G128400 Sobic005G111100--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic004G066800 Sobic004G066800 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic007G152400 Sobic007G152400 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic006G231700 Sobic006G231700 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic003G209000 Sobic003G209000 Sobic001G018500--Sobic003G209000 Sobic007G051000 Sobic007G051000 Sobic001G018500--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic001G018500--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic001G018500--Sobic010G012500 Sobic004G259200 Sobic004G259200 Sobic001G018500--Sobic004G259200 Sobic001G018500--Sobic004G310300 Sobic001G404800 Sobic001G404800 Sobic001G018500--Sobic001G404800 Sobic002G418400 Sobic002G418400 Sobic001G018500--Sobic002G418400 Sobic009G076400 Sobic009G076400 Sobic001G018500--Sobic009G076400 Sobic010G180700--Sobic005G111100 Sobic010G180700--Sobic007G152400 Sobic003G362400 Sobic003G362400 Sobic010G180700--Sobic003G362400 Sobic010G180700--Sobic001G128400 Sobic010G180700--Sobic006G139700 Sobic001G066700 Sobic001G066700 Sobic010G180700--Sobic001G066700 Sobic010G180700--Sobic006G231700 Sobic007G091000 Sobic007G091000 Sobic010G180700--Sobic007G091000 Sobic002G428200 Sobic002G428200 Sobic010G180700--Sobic002G428200 Sobic005G110800 Sobic005G110800 Sobic003G150000--Sobic005G110800 Sobic010G204500 Sobic010G204500 Sobic003G150000--Sobic010G204500 Sobic003G249700 Sobic003G249700 Sobic003G150000--Sobic003G249700 Sobic001G493001 Sobic001G493001 Sobic003G150000--Sobic001G493001 Sobic001G403500 Sobic001G403500 Sobic003G150000--Sobic001G403500 Sobic001G054900 Sobic001G054900 Sobic003G150000--Sobic001G054900 Sobic009G050300 Sobic009G050300 Sobic003G150000--Sobic009G050300 Sobic005G019700 Sobic005G019700 Sobic003G150000--Sobic005G019700 Sobic009G163800 Sobic009G163800 Sobic003G150000--Sobic009G163800 Sobic001G034700 Sobic001G034700 Sobic007G186800--Sobic001G034700 Sobic007G186800--Sobic007G134000 Sobic003G254800 Sobic003G254800 Sobic007G186800--Sobic003G254800 Sobic005G188100 Sobic005G188100 Sobic007G186800--Sobic005G188100 Sobic002G257400 Sobic002G257400 Sobic007G186800--Sobic002G257400 Sobic003G018600 Sobic003G018600 Sobic007G186800--Sobic003G018600 Sobic001G086300 Sobic001G086300 Sobic007G186800--Sobic001G086300 Sobic007G186800--Sobic001G128400 Sobic007G186800--Sobic001G172000 Sobic010G213400 Sobic010G213400 Sobic003G368500--Sobic010G213400 Sobic010G018400 Sobic010G018400 Sobic003G368500--Sobic010G018400 Sobic001G224400 Sobic001G224400 Sobic003G368500--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic003G368500--Sobic003G155400 Sobic003G368500--Sobic004G310300 Sobic004G284500 Sobic004G284500 Sobic003G368500--Sobic004G284500 Sobic003G368500--Sobic005G188100 Sobic003G368500--Sobic007G051000 Sobic001G418900 Sobic001G418900 Sobic003G368500--Sobic001G418900 Sobic002G222900--Sobic003G155400 Sobic002G222900--Sobic001G224400 Sobic002G222900--Sobic007G134000 Sobic010G154700 Sobic010G154700 Sobic002G222900--Sobic010G154700 Sobic007G068000 Sobic007G068000 Sobic002G222900--Sobic007G068000 Sobic010G225300 Sobic010G225300 Sobic002G222900--Sobic010G225300 Sobic001G459200 Sobic001G459200 Sobic002G222900--Sobic001G459200 Sobic002G222900--Sobic001G128400 Sobic002G222900--Sobic007G051000 Sobic001G134400 Sobic001G134400 Sobic007G134000--Sobic001G134400 Sobic007G134000--Sobic003G155400 Sobic002G296200 Sobic002G296200 Sobic007G134000--Sobic002G296200 Sobic007G134000--Sobic007G051000 Sobic007G134000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic007G134000--Sobic006G083500 Sobic007G134000--Sobic003G129800 Sobic003G215700 Sobic003G215700 Sobic007G134000--Sobic003G215700 Sobic007G134000--Sobic004G211833
Octagon: transcription factors


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