Gene annotation
Transcriptome id Sobic.007G186800.1
Synonym Sb07g025680, GRF7, GF14NU
Functional annotation 14-3-3 protein, putative, expressed
UniProt C5YHK9
Pfam PF00244
Panther DB PTHR18860 PTHR18860:SF27
NCBI CDD KOG0841; Multifunctional chaperone (14-3-3 family)
KEGG Orthology K06630; 14-3-3 protein epsilon
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02520 : general regulatory factor 7
RAP-DB (Rice) LOC_Os08g33370.1 : 14-3-3 protein, putative, expressed
MaizeGDB (Corn) Zm00025a005330 , Zm00025a033608 , Zm00025a031106 , Zm00025a005978
Brachypodium KQJ98364 , KQJ98365
Barley -
Wheat -
Populus PNS96387 , PNS22399 , PNS22400


JBrowse

Open New Page


cDNA sequences
Sobic.007G186800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
2 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
3 Sobic.003G254800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
5 Sobic.002G257400 peptidase, T1 family, putative, expressed -
6 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
7 Sobic.001G086300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
9 Sobic.001G172000 expressed protein -
10 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
11 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
12 Sobic.003G254300 peroxiredoxin, putative, expressed -
13 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
14 Sobic.001G048832 - -
15 Sobic.004G103700 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
16 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
17 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
18 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
19 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
20 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1


Gene co-expression network
sample Sobic007G186800 Sobic007G186800 Sobic001G034700 Sobic001G034700 Sobic007G186800--Sobic001G034700 Sobic007G134000 Sobic007G134000 Sobic007G186800--Sobic007G134000 Sobic003G254800 Sobic003G254800 Sobic007G186800--Sobic003G254800 Sobic005G188100 Sobic005G188100 Sobic007G186800--Sobic005G188100 Sobic002G257400 Sobic002G257400 Sobic007G186800--Sobic002G257400 Sobic003G018600 Sobic003G018600 Sobic007G186800--Sobic003G018600 Sobic001G086300 Sobic001G086300 Sobic007G186800--Sobic001G086300 Sobic001G128400 Sobic001G128400 Sobic007G186800--Sobic001G128400 Sobic001G172000 Sobic001G172000 Sobic007G186800--Sobic001G172000 Sobic010G041600 Sobic010G041600 Sobic001G034700--Sobic010G041600 Sobic001G034700--Sobic001G086300 Sobic001G048832 Sobic001G048832 Sobic001G034700--Sobic001G048832 Sobic009G176000 Sobic009G176000 Sobic001G034700--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic001G034700--Sobic007G051000 Sobic001G034700--Sobic005G188100 Sobic003G285800 Sobic003G285800 Sobic001G034700--Sobic003G285800 Sobic010G178200 Sobic010G178200 Sobic001G034700--Sobic010G178200 Sobic003G150000 Sobic003G150000 Sobic001G034700--Sobic003G150000 Sobic001G134400 Sobic001G134400 Sobic007G134000--Sobic001G134400 Sobic003G155400 Sobic003G155400 Sobic007G134000--Sobic003G155400 Sobic002G296200 Sobic002G296200 Sobic007G134000--Sobic002G296200 Sobic007G134000--Sobic007G051000 Sobic001G018500 Sobic001G018500 Sobic007G134000--Sobic001G018500 Sobic006G083500 Sobic006G083500 Sobic007G134000--Sobic006G083500 Sobic003G129800 Sobic003G129800 Sobic007G134000--Sobic003G129800 Sobic003G215700 Sobic003G215700 Sobic007G134000--Sobic003G215700 Sobic004G211833 Sobic004G211833 Sobic007G134000--Sobic004G211833 Sobic001G483100 Sobic001G483100 Sobic003G254800--Sobic001G483100 Sobic003G249700 Sobic003G249700 Sobic003G254800--Sobic003G249700 Sobic010G204500 Sobic010G204500 Sobic003G254800--Sobic010G204500 Sobic003G254300 Sobic003G254300 Sobic003G254800--Sobic003G254300 Sobic001G537200 Sobic001G537200 Sobic003G254800--Sobic001G537200 Sobic001G039400 Sobic001G039400 Sobic003G254800--Sobic001G039400 Sobic001G018900 Sobic001G018900 Sobic003G254800--Sobic001G018900 Sobic003G408100 Sobic003G408100 Sobic003G254800--Sobic003G408100 Sobic003G254800--Sobic001G128400 Sobic002G190900 Sobic002G190900 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic002G398901 Sobic002G398901 Sobic005G188100--Sobic002G398901 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic005G188100--Sobic004G211833 Sobic007G076300 Sobic007G076300 Sobic002G257400--Sobic007G076300 Sobic004G224900 Sobic004G224900 Sobic002G257400--Sobic004G224900 Sobic004G335000 Sobic004G335000 Sobic002G257400--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic002G257400--Sobic002G428200 Sobic007G152400 Sobic007G152400 Sobic002G257400--Sobic007G152400 Sobic004G204800 Sobic004G204800 Sobic002G257400--Sobic004G204800 Sobic002G257400--Sobic007G186800 Sobic004G138800 Sobic004G138800 Sobic002G257400--Sobic004G138800 Sobic001G058100 Sobic001G058100 Sobic002G257400--Sobic001G058100 Sobic002G286900 Sobic002G286900 Sobic003G018600--Sobic002G286900 Sobic006G115000 Sobic006G115000 Sobic003G018600--Sobic006G115000 Sobic003G018600--Sobic009G166500 Sobic001G377800 Sobic001G377800 Sobic003G018600--Sobic001G377800 Sobic005G110800 Sobic005G110800 Sobic003G018600--Sobic005G110800 Sobic009G050300 Sobic009G050300 Sobic003G018600--Sobic009G050300 Sobic006G137100 Sobic006G137100 Sobic003G018600--Sobic006G137100 Sobic003G018600--Sobic009G163800 Sobic003G018600--Sobic003G249700 Sobic001G086300--Sobic006G047400 Sobic001G086300--Sobic005G110800 Sobic001G086300--Sobic009G166500 Sobic004G280700 Sobic004G280700 Sobic001G086300--Sobic004G280700 Sobic001G086300--Sobic001G034700 Sobic001G086300--Sobic009G163800 Sobic006G106100 Sobic006G106100 Sobic001G086300--Sobic006G106100 Sobic004G331400 Sobic004G331400 Sobic001G086300--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic001G086300--Sobic002G175100 Sobic005G111100 Sobic005G111100 Sobic001G128400--Sobic005G111100 Sobic001G128400--Sobic003G129800 Sobic001G128400--Sobic010G204500 Sobic006G081100 Sobic006G081100 Sobic001G128400--Sobic006G081100 Sobic001G128400--Sobic003G249700 Sobic002G049300 Sobic002G049300 Sobic001G128400--Sobic002G049300 Sobic010G054200 Sobic010G054200 Sobic001G128400--Sobic010G054200 Sobic003G280700 Sobic003G280700 Sobic001G128400--Sobic003G280700 Sobic003G109600 Sobic003G109600 Sobic001G128400--Sobic003G109600 Sobic001G014500 Sobic001G014500 Sobic001G172000--Sobic001G014500 Sobic001G172000--Sobic005G110800 Sobic009G119900 Sobic009G119900 Sobic001G172000--Sobic009G119900 Sobic001G025600 Sobic001G025600 Sobic001G172000--Sobic001G025600 Sobic001G172000--Sobic001G377800 Sobic001G172000--Sobic006G081100 Sobic004G103700 Sobic004G103700 Sobic001G172000--Sobic004G103700 Sobic007G019400 Sobic007G019400 Sobic001G172000--Sobic007G019400 Sobic001G172000--Sobic003G249700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.