Gene annotation
Transcriptome id Sobic.003G254800.1
Synonym auxin/indole-3-acetic acid (Aux/IAA), IAA8, Sb03g030995, SbIAA10
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments" (PubMedID : 20499123)
OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt A0A1B6Q5B1
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF16
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT2G22670 : indoleacetic acid-induced protein 8
RAP-DB (Rice) LOC_Os01g48444.1 : OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a043205 , Zm00025a007712 , Zm00025a043448 , Zm00025a028067 , Zm00025a038821 , Zm00025a037563
Brachypodium KQK09168
Barley HORVU2Hr1G027570.1 , HORVU3Hr1G062160.8 , HORVU3Hr1G062160.9 , HORVU3Hr1G062160.2 , HORVU3Hr1G062160.3 , HORVU3Hr1G062160.6 , HORVU3Hr1G062160.7 , HORVU3Hr1G062160.4 , HORVU3Hr1G062160.5 , HORVU1Hr1G086070.1 , HORVU1Hr1G086070.2 , HORVU1Hr1G086070.3 , HORVU1Hr1G086070.4 , HORVU1Hr1G086070.5 , HORVU1Hr1G086070.6 , HORVU1Hr1G086070.7 , HORVU1Hr1G086070.8 , HORVU3Hr1G062160.10 , HORVU3Hr1G088810.2 , HORVU3Hr1G088810.3 , HORVU3Hr1G088810.1 , HORVU3Hr1G088810.6 , HORVU3Hr1G088810.4 , HORVU3Hr1G088810.5
Wheat TraesCS3A02G270000 , TraesCS1A02G390200 , TraesCS1D02G398400 , TraesCS3D02G269700 , TraesCS1B02G418400 , TraesCS3B02G303900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G483100 peptidase, T1 family, putative, expressed K02730: 20S proteasome subunit alpha 1
2 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
3 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
4 Sobic.003G254300 peroxiredoxin, putative, expressed -
5 Sobic.001G537200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
6 Sobic.001G039400 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
7 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
8 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
9 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
10 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
11 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
12 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
13 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
14 Sobic.003G018600 LSM domain containing protein, expressed K11097: SNRPE, small nuclear ribonucleoprotein E
15 Sobic.007G053300 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
16 Sobic.007G186800 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
17 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
18 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
19 Sobic.010G205400 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
20 Sobic.006G081100 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e


Gene co-expression network
sample Sobic003G254800 Sobic003G254800 Sobic001G483100 Sobic001G483100 Sobic003G254800--Sobic001G483100 Sobic003G249700 Sobic003G249700 Sobic003G254800--Sobic003G249700 Sobic010G204500 Sobic010G204500 Sobic003G254800--Sobic010G204500 Sobic003G254300 Sobic003G254300 Sobic003G254800--Sobic003G254300 Sobic001G537200 Sobic001G537200 Sobic003G254800--Sobic001G537200 Sobic001G039400 Sobic001G039400 Sobic003G254800--Sobic001G039400 Sobic001G018900 Sobic001G018900 Sobic003G254800--Sobic001G018900 Sobic003G408100 Sobic003G408100 Sobic003G254800--Sobic003G408100 Sobic001G128400 Sobic001G128400 Sobic003G254800--Sobic001G128400 Sobic001G483100--Sobic010G204500 Sobic009G180000 Sobic009G180000 Sobic001G483100--Sobic009G180000 Sobic001G014500 Sobic001G014500 Sobic001G483100--Sobic001G014500 Sobic002G056200 Sobic002G056200 Sobic001G483100--Sobic002G056200 Sobic001G483100--Sobic003G249700 Sobic005G229300 Sobic005G229300 Sobic001G483100--Sobic005G229300 Sobic002G379500 Sobic002G379500 Sobic001G483100--Sobic002G379500 Sobic001G483100--Sobic001G537200 Sobic003G109600 Sobic003G109600 Sobic001G483100--Sobic003G109600 Sobic007G019400 Sobic007G019400 Sobic003G249700--Sobic007G019400 Sobic001G226500 Sobic001G226500 Sobic003G249700--Sobic001G226500 Sobic003G249700--Sobic001G039400 Sobic003G387900 Sobic003G387900 Sobic003G249700--Sobic003G387900 Sobic002G047600 Sobic002G047600 Sobic003G249700--Sobic002G047600 Sobic007G178600 Sobic007G178600 Sobic003G249700--Sobic007G178600 Sobic004G008400 Sobic004G008400 Sobic003G249700--Sobic004G008400 Sobic001G085400 Sobic001G085400 Sobic003G249700--Sobic001G085400 Sobic003G249700--Sobic003G109600 Sobic001G403500 Sobic001G403500 Sobic010G204500--Sobic001G403500 Sobic010G204500--Sobic001G483100 Sobic001G016400 Sobic001G016400 Sobic010G204500--Sobic001G016400 Sobic009G050300 Sobic009G050300 Sobic010G204500--Sobic009G050300 Sobic010G204500--Sobic009G180000 Sobic010G204500--Sobic002G056200 Sobic002G081600 Sobic002G081600 Sobic010G204500--Sobic002G081600 Sobic009G215200 Sobic009G215200 Sobic010G204500--Sobic009G215200 Sobic010G204500--Sobic001G018900 Sobic003G254300--Sobic009G215200 Sobic001G130301 Sobic001G130301 Sobic003G254300--Sobic001G130301 Sobic004G211833 Sobic004G211833 Sobic003G254300--Sobic004G211833 Sobic003G254300--Sobic001G018900 Sobic001G374700 Sobic001G374700 Sobic003G254300--Sobic001G374700 Sobic010G012500 Sobic010G012500 Sobic003G254300--Sobic010G012500 Sobic006G047400 Sobic006G047400 Sobic003G254300--Sobic006G047400 Sobic007G051000 Sobic007G051000 Sobic003G254300--Sobic007G051000 Sobic007G197800 Sobic007G197800 Sobic003G254300--Sobic007G197800 Sobic001G537200--Sobic009G050300 Sobic001G537200--Sobic001G018900 Sobic001G537200--Sobic007G197800 Sobic001G537200--Sobic002G379500 Sobic001G537200--Sobic009G215200 Sobic007G019000 Sobic007G019000 Sobic001G537200--Sobic007G019000 Sobic006G116700 Sobic006G116700 Sobic001G537200--Sobic006G116700 Sobic001G537200--Sobic001G130301 Sobic001G537200--Sobic001G403500 Sobic001G039400--Sobic003G249700 Sobic001G039400--Sobic003G109600 Sobic010G069400 Sobic010G069400 Sobic001G039400--Sobic010G069400 Sobic002G304900 Sobic002G304900 Sobic001G039400--Sobic002G304900 Sobic009G233400 Sobic009G233400 Sobic001G039400--Sobic009G233400 Sobic009G173500 Sobic009G173500 Sobic001G039400--Sobic009G173500 Sobic001G039400--Sobic007G019400 Sobic001G039400--Sobic002G047600 Sobic005G050500 Sobic005G050500 Sobic001G039400--Sobic005G050500 Sobic001G018900--Sobic006G116700 Sobic001G018900--Sobic009G215200 Sobic001G018900--Sobic009G050300 Sobic001G036900 Sobic001G036900 Sobic001G018900--Sobic001G036900 Sobic001G018900--Sobic007G197800 Sobic002G375100 Sobic002G375100 Sobic001G018900--Sobic002G375100 Sobic001G018900--Sobic001G130301 Sobic001G018900--Sobic001G016400 Sobic001G018900--Sobic003G408100 Sobic001G054900 Sobic001G054900 Sobic003G408100--Sobic001G054900 Sobic003G152600 Sobic003G152600 Sobic003G408100--Sobic003G152600 Sobic003G408100--Sobic001G018900 Sobic009G163800 Sobic009G163800 Sobic003G408100--Sobic009G163800 Sobic003G408100--Sobic006G116700 Sobic010G206200 Sobic010G206200 Sobic003G408100--Sobic010G206200 Sobic003G408100--Sobic009G050300 Sobic003G408100--Sobic001G036900 Sobic003G408100--Sobic009G215200 Sobic005G111100 Sobic005G111100 Sobic001G128400--Sobic005G111100 Sobic003G129800 Sobic003G129800 Sobic001G128400--Sobic003G129800 Sobic001G128400--Sobic010G204500 Sobic006G081100 Sobic006G081100 Sobic001G128400--Sobic006G081100 Sobic001G128400--Sobic003G249700 Sobic002G049300 Sobic002G049300 Sobic001G128400--Sobic002G049300 Sobic010G054200 Sobic010G054200 Sobic001G128400--Sobic010G054200 Sobic003G280700 Sobic003G280700 Sobic001G128400--Sobic003G280700 Sobic001G128400--Sobic003G109600
Octagon: transcription factors


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